Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mir208a-201ENSMUST00000083498 83 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Col5a1O88207 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Col5a1O88207 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col5a1O88207 Gm26421-201ENSMUST00000104279 132 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm16242-201ENSMUST00000117741 334 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm11862-201ENSMUST00000119678 659 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23120-201ENSMUST00000157654 287 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23262-201ENSMUST00000158323 168 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col5a1O88207 Gm6660-201ENSMUST00000179149 468 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
Col5a1O88207 Gm27265-201ENSMUST00000183559 77 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm28995-201ENSMUST00000186625 261 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm29147-201ENSMUST00000186846 315 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm20058-201ENSMUST00000186939 284 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm29227-201ENSMUST00000187139 315 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm29034-201ENSMUST00000188099 315 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm28160-201ENSMUST00000191229 315 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm37129-201ENSMUST00000195791 315 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm19202-201ENSMUST00000198096 808 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm45616-201ENSMUST00000211711 319 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm45754-201ENSMUST00000212380 279 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm45791-201ENSMUST00000212908 352 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm22685-201ENSMUST00000082848 106 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23845-201ENSMUST00000083834 152 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Mdga2-203ENSMUST00000113942 423 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm13378-201ENSMUST00000117483 336 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm13672-201ENSMUST00000117554 459 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm13711-201ENSMUST00000119708 453 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm26256-201ENSMUST00000122499 186 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm24385-201ENSMUST00000122694 350 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23589-201ENSMUST00000157660 105 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm22654-201ENSMUST00000157874 105 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm24726-201ENSMUST00000158232 121 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm24942-201ENSMUST00000158328 114 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23579-201ENSMUST00000158528 103 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Mir6381-201ENSMUST00000183426 87 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm28848-201ENSMUST00000189984 168 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm37801-201ENSMUST00000194754 274 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Col5a1O88207 Gm8940-201ENSMUST00000212585 219 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.17□□□□□ -2.22
Col5a1O88207 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm10298-201ENSMUST00000074801 265 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm23423-201ENSMUST00000082782 106 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Gm25651-201ENSMUST00000083782 119 ntBASIC1.17□□□□□ -2.22
Col5a1O88207 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col5a1O88207 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col5a1O88207 Gm11798-201ENSMUST00000119150 421 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm5329-201ENSMUST00000186898 463 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm34073-201ENSMUST00000195736 212 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm18991-201ENSMUST00000209225 746 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm9318-201ENSMUST00000222444 438 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm19118-201ENSMUST00000222554 98 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.16□□□□□ -2.22
Col5a1O88207 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Gm23055-201ENSMUST00000082805 94 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Mir496a-201ENSMUST00000093627 79 ntBASIC1.16□□□□□ -2.22
Col5a1O88207 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col5a1O88207 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col5a1O88207 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23126-201ENSMUST00000104260 134 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23202-201ENSMUST00000104376 129 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col5a1O88207 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm13541-201ENSMUST00000119519 283 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm12309-201ENSMUST00000119889 182 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm14883-201ENSMUST00000120179 157 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23232-201ENSMUST00000157300 105 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm25454-201ENSMUST00000157947 315 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm17113-201ENSMUST00000170118 171 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Col5a1O88207 Snora24-201ENSMUST00000174989 130 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23355-201ENSMUST00000177614 107 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23148-201ENSMUST00000180367 107 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Mir6402-201ENSMUST00000183406 80 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm43914-201ENSMUST00000203592 594 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.15□□□□□ -2.22
Col5a1O88207 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Col5a1O88207 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Col5a1O88207 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col5a1O88207 Gm25258-201ENSMUST00000083049 107 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Gm23679-201ENSMUST00000083161 119 ntBASIC1.15□□□□□ -2.22
Col5a1O88207 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Col5a1O88207 Gm24582-201ENSMUST00000103967 103 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm13725-201ENSMUST00000122139 207 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm23559-201ENSMUST00000157824 103 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm25643-201ENSMUST00000158874 103 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm25450-201ENSMUST00000179144 107 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Mir6355-201ENSMUST00000183687 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms