Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mir3087-201ENSMUST00000199405 56 ntBASIC2.14□□□□□ -2.07
Trdmt1O55055 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.14□□□□□ -2.07
Trdmt1O55055 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.14□□□□□ -2.07
Trdmt1O55055 Snora69-201ENSMUST00000083708 131 ntBASIC2.14□□□□□ -2.07
Trdmt1O55055 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm22494-201ENSMUST00000104495 128 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm11936-201ENSMUST00000118323 160 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm12721-201ENSMUST00000120621 268 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm14770-201ENSMUST00000122197 312 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm22556-201ENSMUST00000157803 100 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm24638-201ENSMUST00000179807 132 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Mir7678-201ENSMUST00000185076 71 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm19901-201ENSMUST00000192191 495 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm38060-201ENSMUST00000194822 464 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Gm22294-201ENSMUST00000083308 104 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.13□□□□□ -2.07
Trdmt1O55055 Mir1b-201ENSMUST00000117012 122 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm15215-201ENSMUST00000117773 489 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm14774-201ENSMUST00000117857 536 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm15365-201ENSMUST00000122392 300 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm23324-201ENSMUST00000157421 131 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm22215-201ENSMUST00000157558 96 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm22800-201ENSMUST00000175627 94 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm23047-201ENSMUST00000177661 94 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm26265-202ENSMUST00000196326 133 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm2829-201ENSMUST00000213121 499 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trdmt1O55055 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm23246-201ENSMUST00000083371 67 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trdmt1O55055 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.12□□□□□ -2.07
Trdmt1O55055 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm26479-201ENSMUST00000122620 106 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm22551-201ENSMUST00000157795 103 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm22315-201ENSMUST00000158010 143 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm27979-201ENSMUST00000185126 56 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm44024-201ENSMUST00000203008 476 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 Rny1-201ENSMUST00000083767 112 ntBASIC2.11□□□□□ -2.07
Trdmt1O55055 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.11□□□□□ -2.07
Trdmt1O55055 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trdmt1O55055 Gm24049-201ENSMUST00000102409 100 ntBASIC2.1□□□□□ -2.07
Trdmt1O55055 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.1□□□□□ -2.07
Trdmt1O55055 Gm23640-201ENSMUST00000157860 104 ntBASIC2.1□□□□□ -2.07
Trdmt1O55055 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.1□□□□□ -2.07
Trdmt1O55055 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.1□□□□□ -2.07
Trdmt1O55055 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.1□□□□□ -2.07
Trdmt1O55055 Gm24522-201ENSMUST00000083964 108 ntBASIC2.1□□□□□ -2.07
Trdmt1O55055 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trdmt1O55055 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trdmt1O55055 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Trdmt1O55055 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Trdmt1O55055 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm12351-201ENSMUST00000118727 292 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm14215-201ENSMUST00000120578 221 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm22537-201ENSMUST00000158172 199 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm24076-201ENSMUST00000158179 94 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm28849-201ENSMUST00000188127 174 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm29167-201ENSMUST00000190024 377 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm28330-201ENSMUST00000190353 171 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm37586-201ENSMUST00000193654 204 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm22299-201ENSMUST00000082663 136 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.09□□□□□ -2.07
Trdmt1O55055 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.09□□□□□ -2.07
Trdmt1O55055 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trdmt1O55055 Mir301b-201ENSMUST00000102333 97 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Snord11-201ENSMUST00000158468 84 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm7592-201ENSMUST00000160674 627 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm26426-201ENSMUST00000177866 123 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm26060-201ENSMUST00000180094 123 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Mir465d-201ENSMUST00000196314 58 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm43676-201ENSMUST00000197532 540 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.08□□□□□ -2.08
Trdmt1O55055 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm25589-201ENSMUST00000082502 166 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Gm24355-201ENSMUST00000082858 122 ntBASIC2.08□□□□□ -2.08
Trdmt1O55055 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm23013-201ENSMUST00000104146 106 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm25961-201ENSMUST00000157174 135 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm24818-201ENSMUST00000175093 161 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm29005-201ENSMUST00000186773 320 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm20144-201ENSMUST00000203031 165 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Gm25813-201ENSMUST00000082748 191 ntBASIC2.07□□□□□ -2.08
Trdmt1O55055 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trdmt1O55055 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms