Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm15266-201ENSMUST00000119635 255 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22038-201ENSMUST00000157277 242 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm26365-201ENSMUST00000179177 94 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.66□□□□□ -2.52
Trav4-3A0A0B4J1K1 Snord69-201ENSMUST00000104024 80 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23184-201ENSMUST00000122594 131 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm18971-201ENSMUST00000197240 374 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm43026-201ENSMUST00000202972 325 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC163033.1-201ENSMUST00000218608 157 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23453-201ENSMUST00000083326 106 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir344-201ENSMUST00000083634 95 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.67□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm42736-201ENSMUST00000200723 1353 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm12106-201ENSMUST00000116006 1200 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm25334-201ENSMUST00000158036 110 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm24137-201ENSMUST00000180055 79 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22391-201ENSMUST00000180356 79 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23924-201ENSMUST00000082474 108 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm24535-201ENSMUST00000083140 107 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir490-201ENSMUST00000093567 84 ntBASIC-0.68□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm15175-201ENSMUST00000117629 132 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir7009-201ENSMUST00000184519 64 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.69□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir687-201ENSMUST00000102166 89 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm15193-201ENSMUST00000120224 865 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23535-201ENSMUST00000157542 106 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22801-201ENSMUST00000175624 84 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Snord116l14-201ENSMUST00000179875 94 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Mir7062-201ENSMUST00000185038 66 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC098718.1-201ENSMUST00000226166 175 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.71□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm25838-201ENSMUST00000158920 120 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC123656.2-201ENSMUST00000226726 227 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 AC133654.1-201ENSMUST00000228411 672 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm23452-201ENSMUST00000083327 107 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm22577-201ENSMUST00000083731 109 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.72□□□□□ -2.52
Trav4-3A0A0B4J1K1 Gm13475-201ENSMUST00000119290 234 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm6829-201ENSMUST00000119858 360 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm2020-201ENSMUST00000145242 579 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm25162-201ENSMUST00000158906 159 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.73□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm14359-201ENSMUST00000118883 424 ntBASIC-0.74□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.74□□□□□ -2.53
Trav4-3A0A0B4J1K1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms