Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm24517-201ENSMUST00000122560 107 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm22279-201ENSMUST00000157200 93 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm26149-201ENSMUST00000157432 108 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm26501-201ENSMUST00000178307 107 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm38060-201ENSMUST00000194822 464 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm44465-201ENSMUST00000199536 114 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm44830-201ENSMUST00000207667 584 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm25404-201ENSMUST00000082970 107 ntBASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
Trav6-6A0A075B603 Gm22591-201ENSMUST00000104243 106 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Gm23130-201ENSMUST00000104252 74 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Gm22545-201ENSMUST00000104350 132 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Mir190b-201ENSMUST00000104803 80 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Mir6364-201ENSMUST00000183396 86 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Mir7009-201ENSMUST00000184519 64 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Gm28848-201ENSMUST00000189984 168 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Gm45315-201ENSMUST00000209283 333 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
Trav6-6A0A075B603 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm26278-201ENSMUST00000157098 132 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm25884-201ENSMUST00000157782 62 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm22011-201ENSMUST00000158790 123 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm27659-201ENSMUST00000183472 98 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm28661-201ENSMUST00000188231 681 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm28926-201ENSMUST00000191063 680 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm28408-201ENSMUST00000191557 463 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm43432-201ENSMUST00000196352 121 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm44395-201ENSMUST00000197056 153 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm44976-201ENSMUST00000205543 261 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm24625-201ENSMUST00000082622 130 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.33□□□□□ -2.36
Trav6-6A0A075B603 Gm26303-201ENSMUST00000116845 119 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm14803-201ENSMUST00000117163 361 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm14007-201ENSMUST00000118288 210 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm11512-201ENSMUST00000119669 663 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm22281-201ENSMUST00000157198 103 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm22796-201ENSMUST00000157234 106 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm22733-201ENSMUST00000158094 91 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm22522-201ENSMUST00000158271 151 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm24678-201ENSMUST00000158756 104 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Mir15a-201ENSMUST00000175266 84 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm25750-201ENSMUST00000175483 112 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm28435-201ENSMUST00000185496 108 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm34015-201ENSMUST00000194908 451 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm11351-202ENSMUST00000225724 478 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm24152-201ENSMUST00000082764 163 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm26314-201ENSMUST00000083891 107 ntBASIC0.32□□□□□ -2.36
Trav6-6A0A075B603 Gm25378-201ENSMUST00000104333 129 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm24191-201ENSMUST00000157977 122 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm26484-201ENSMUST00000158018 106 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm26358-201ENSMUST00000158215 97 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm27236-201ENSMUST00000184147 442 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm27656-201ENSMUST00000185055 80 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm44923-201ENSMUST00000206673 85 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm23731-201ENSMUST00000083749 107 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.31□□□□□ -2.36
Trav6-6A0A075B603 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm13729-201ENSMUST00000120328 406 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm21894-201ENSMUST00000179631 546 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm27817-201ENSMUST00000184302 233 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Mir6540-201ENSMUST00000184886 108 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm37641-201ENSMUST00000193837 239 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm22884-201ENSMUST00000083127 140 ntBASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.3□□□□□ -2.36
Trav6-6A0A075B603 Gm22759-201ENSMUST00000102276 96 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm11794-201ENSMUST00000119446 237 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm23111-201ENSMUST00000122652 105 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm25901-201ENSMUST00000158494 130 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm27793-201ENSMUST00000183405 76 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm44325-201ENSMUST00000196757 77 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm43406-201ENSMUST00000200356 334 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm44921-201ENSMUST00000205290 301 ntBASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav6-6A0A075B603 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms