Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm14307-201ENSMUST00000118930 291 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm13992-201ENSMUST00000120558 156 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm11834-201ENSMUST00000122257 585 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm25805-201ENSMUST00000122788 108 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm14297-201ENSMUST00000129110 291 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm16362-201ENSMUST00000135189 214 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm16358-201ENSMUST00000146046 210 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm23262-201ENSMUST00000158323 168 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm22836-201ENSMUST00000158441 61 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm22945-201ENSMUST00000158557 157 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Mir1936-201ENSMUST00000158699 93 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm38041-201ENSMUST00000194445 661 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Mir7661-201ENSMUST00000197023 61 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm43578-201ENSMUST00000201250 459 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Mir429-201ENSMUST00000083493 83 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Mir32-201ENSMUST00000083610 70 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Gm24765-201ENSMUST00000083691 103 ntBASIC1.61□□□□□ -2.15
Cldn3Q9Z0G9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm9059-201ENSMUST00000118319 183 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm22510-201ENSMUST00000179304 79 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm26336-201ENSMUST00000179449 79 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm26390-201ENSMUST00000179628 79 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm29657-201ENSMUST00000189807 342 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm44063-201ENSMUST00000203307 376 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cldn3Q9Z0G9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm23921-201ENSMUST00000175258 107 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm37713-201ENSMUST00000191746 198 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm35736-201ENSMUST00000203681 313 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Gm46997-201ENSMUST00000222108 217 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.59□□□□□ -2.15
Cldn3Q9Z0G9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Cldn3Q9Z0G9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Mir759-201ENSMUST00000103254 98 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm23048-201ENSMUST00000157237 129 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm23232-201ENSMUST00000157300 105 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm26150-201ENSMUST00000157426 151 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm17052-201ENSMUST00000165496 289 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm23355-201ENSMUST00000177614 107 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm25253-201ENSMUST00000179958 107 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm17067-202ENSMUST00000180131 123 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm25284-201ENSMUST00000180345 141 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm23148-201ENSMUST00000180367 107 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm27793-201ENSMUST00000183405 76 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm37313-201ENSMUST00000191673 290 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm36946-201ENSMUST00000192706 435 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm20144-201ENSMUST00000203031 165 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm25258-201ENSMUST00000083049 107 ntBASIC1.58□□□□□ -2.16
Cldn3Q9Z0G9 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm14678-201ENSMUST00000121396 482 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm45207-201ENSMUST00000207469 145 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm24355-201ENSMUST00000082858 122 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Gm23851-201ENSMUST00000083831 103 ntBASIC1.57□□□□□ -2.16
Cldn3Q9Z0G9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm14298-201ENSMUST00000139032 237 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm16356-201ENSMUST00000143300 169 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Gm20477-201ENSMUST00000174028 280 ntBASIC1.56□□□□□ -2.16
Cldn3Q9Z0G9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms