Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm11704-201ENSMUST00000120031 214 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm25323-201ENSMUST00000122555 103 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm22558-201ENSMUST00000157326 95 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm23257-201ENSMUST00000158322 132 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm24842-201ENSMUST00000158681 54 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm20438-201ENSMUST00000174441 329 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm27392-201ENSMUST00000185041 101 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm46233-201ENSMUST00000217831 449 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Gm22972-201ENSMUST00000083297 131 ntBASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim39Q9ESN2 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm12513-201ENSMUST00000118617 352 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm24894-201ENSMUST00000122744 118 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm25882-201ENSMUST00000157784 85 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm26126-201ENSMUST00000083188 164 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Gm25480-201ENSMUST00000083217 133 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Mir340-201ENSMUST00000083483 98 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim39Q9ESN2 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim39Q9ESN2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim39Q9ESN2 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm14567-201ENSMUST00000117155 174 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm23599-201ENSMUST00000157261 251 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm22310-201ENSMUST00000157509 116 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm25888-201ENSMUST00000157778 302 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Mir7039-201ENSMUST00000183852 85 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm27249-201ENSMUST00000185049 328 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm44084-201ENSMUST00000203947 409 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim39Q9ESN2 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm23532-201ENSMUST00000104569 112 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm25753-201ENSMUST00000116792 121 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm13885-201ENSMUST00000117569 187 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm12335-201ENSMUST00000119738 327 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm22221-201ENSMUST00000157362 103 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm17117-201ENSMUST00000163665 299 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm37377-201ENSMUST00000191733 304 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm37428-201ENSMUST00000193886 137 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm4036-201ENSMUST00000220842 626 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Gm19563-201ENSMUST00000222031 270 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim39Q9ESN2 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Mir693-201ENSMUST00000102187 89 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Gm24598-201ENSMUST00000122510 74 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Gm27672-201ENSMUST00000183751 204 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.19□□□□□ -1.9
Trim39Q9ESN2 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Mir27a-201ENSMUST00000083510 87 ntBASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim39Q9ESN2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim39Q9ESN2 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm22004-201ENSMUST00000101884 107 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm25105-201ENSMUST00000122477 130 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm22490-201ENSMUST00000157188 119 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Mir5710-201ENSMUST00000176884 69 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm44355-201ENSMUST00000200417 104 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm44666-201ENSMUST00000208544 391 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Gm25130-201ENSMUST00000082650 156 ntBASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim39Q9ESN2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm24126-201ENSMUST00000104111 106 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm25828-201ENSMUST00000157087 95 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm23602-201ENSMUST00000157258 132 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm45080-201ENSMUST00000206648 283 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.17□□□□□ -1.9
Trim39Q9ESN2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms