Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm25066-201ENSMUST00000158145 123 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm25470-201ENSMUST00000175576 111 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm24388-201ENSMUST00000177872 107 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm22756-201ENSMUST00000180118 107 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm28344-201ENSMUST00000185704 279 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Trbv6-201ENSMUST00000193743 276 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm37085-201ENSMUST00000193780 196 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm43563-201ENSMUST00000196761 198 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim8Q99PJ2 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm26054-201ENSMUST00000083037 107 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm24492-201ENSMUST00000083798 107 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Trim8Q99PJ2 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm12723-201ENSMUST00000120700 451 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm11334-201ENSMUST00000121969 156 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm16111-201ENSMUST00000162128 285 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm27249-201ENSMUST00000185049 328 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm29603-201ENSMUST00000186792 334 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Gm18502-201ENSMUST00000218679 199 ntBASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim8Q99PJ2 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm22151-201ENSMUST00000116963 58 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm23536-201ENSMUST00000157541 134 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm25424-201ENSMUST00000157612 58 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm16404-201ENSMUST00000177739 468 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm14598-201ENSMUST00000180109 468 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm14625-201ENSMUST00000180231 468 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim8Q99PJ2 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm43217-201ENSMUST00000199513 367 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Gm44182-201ENSMUST00000204052 115 ntBASIC2.86□□□□□ -1.95
Trim8Q99PJ2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim8Q99PJ2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Gm22678-201ENSMUST00000116974 101 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Gm25625-201ENSMUST00000157221 96 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Gm24054-201ENSMUST00000158619 105 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Mir1966-201ENSMUST00000158807 108 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Gm7592-201ENSMUST00000160674 627 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Mir5123-201ENSMUST00000177794 83 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Snord104-201ENSMUST00000083192 70 ntBASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trim8Q99PJ2 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm25168-201ENSMUST00000104189 132 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm22713-201ENSMUST00000116895 130 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm16171-201ENSMUST00000118004 324 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm12412-201ENSMUST00000121867 328 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm25457-201ENSMUST00000179509 107 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim8Q99PJ2 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim8Q99PJ2 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trim8Q99PJ2 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Gm13801-201ENSMUST00000120750 160 ntBASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Gm42774-201ENSMUST00000198854 283 ntBASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Gm45445-201ENSMUST00000209586 232 ntBASIC2.83□□□□□ -1.96
Trim8Q99PJ2 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.83□□□□□ -1.96
Trim8Q99PJ2 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trim8Q99PJ2 Gm25308-201ENSMUST00000104171 158 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm15365-201ENSMUST00000122392 300 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm23325-201ENSMUST00000157422 129 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm23895-201ENSMUST00000158108 160 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm26403-201ENSMUST00000158500 105 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm25020-201ENSMUST00000178071 107 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm45791-201ENSMUST00000212908 352 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Gm25895-201ENSMUST00000083714 100 ntBASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trim8Q99PJ2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim8Q99PJ2 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim8Q99PJ2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.81□□□□□ -1.96
Trim8Q99PJ2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.81□□□□□ -1.96
Trim8Q99PJ2 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim8Q99PJ2 Gm13797-201ENSMUST00000121792 120 ntBASIC2.81□□□□□ -1.96
Trim8Q99PJ2 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.81□□□□□ -1.96
Trim8Q99PJ2 Gm24892-201ENSMUST00000122747 104 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms