Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm37641-201ENSMUST00000193837 239 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Gm44326-201ENSMUST00000198226 101 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.66□□□□□ -2.3
Lsm1Q8VC85 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Gm22572-201ENSMUST00000082985 105 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Mir216a-201ENSMUST00000083605 72 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Gm24261-201ENSMUST00000083744 104 ntBASIC0.66□□□□□ -2.3
Lsm1Q8VC85 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm25543-201ENSMUST00000122678 312 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Mir1936-201ENSMUST00000158699 93 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Mir3968-201ENSMUST00000175355 100 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm22802-201ENSMUST00000175621 89 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm27659-201ENSMUST00000183472 98 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm44923-201ENSMUST00000206673 85 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Gm22306-201ENSMUST00000082692 107 ntBASIC0.65□□□□□ -2.31
Lsm1Q8VC85 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Gm25876-201ENSMUST00000104329 119 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Gm13153-201ENSMUST00000120969 637 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Gm26149-201ENSMUST00000157432 108 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Mir3109-201ENSMUST00000175301 88 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Gm44396-201ENSMUST00000199843 114 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Gm24038-201ENSMUST00000082872 159 ntBASIC0.64□□□□□ -2.31
Lsm1Q8VC85 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
Lsm1Q8VC85 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm22308-201ENSMUST00000177609 107 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Mir7052-201ENSMUST00000184821 65 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm29167-201ENSMUST00000190024 377 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm42855-201ENSMUST00000197388 253 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm23093-201ENSMUST00000083450 102 ntBASIC0.63□□□□□ -2.31
Lsm1Q8VC85 Gm26339-201ENSMUST00000102368 99 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm26301-201ENSMUST00000104813 95 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm22733-201ENSMUST00000158094 91 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm16404-201ENSMUST00000177739 468 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm7958-201ENSMUST00000178255 468 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm7950-201ENSMUST00000179633 468 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm14598-201ENSMUST00000180109 468 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm14625-201ENSMUST00000180231 468 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm29352-201ENSMUST00000188054 544 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm43250-201ENSMUST00000196536 273 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm24311-201ENSMUST00000082570 104 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Mir362-201ENSMUST00000093592 65 ntBASIC0.62□□□□□ -2.31
Lsm1Q8VC85 Gm3027-201ENSMUST00000167579 451 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Mir6364-201ENSMUST00000183396 86 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Gm28926-201ENSMUST00000191063 680 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Gm42719-201ENSMUST00000197393 355 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Gm45315-201ENSMUST00000209283 333 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Gm32300-201ENSMUST00000221735 515 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 DQ267101-201ENSMUST00000082562 73 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 Gm24624-201ENSMUST00000082617 164 ntBASIC0.61□□□□□ -2.31
Lsm1Q8VC85 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm22935-201ENSMUST00000103960 104 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm11572-201ENSMUST00000119164 120 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm25884-201ENSMUST00000157782 62 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm25166-201ENSMUST00000158909 111 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm26501-201ENSMUST00000178307 107 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm28414-201ENSMUST00000190111 294 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm44282-201ENSMUST00000203199 190 ntBASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Lsm1Q8VC85 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm26278-201ENSMUST00000157098 132 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm24191-201ENSMUST00000157977 122 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm21894-201ENSMUST00000179631 546 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Lsm1Q8VC85 Gm23203-201ENSMUST00000104374 107 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Gm23111-201ENSMUST00000122652 105 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Gm28848-201ENSMUST00000189984 168 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Gm43406-201ENSMUST00000200356 334 ntBASIC0.58□□□□□ -2.32
Lsm1Q8VC85 Gm43898-201ENSMUST00000204456 424 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms