Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm44470-201ENSMUST00000203913 142 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm45907-201ENSMUST00000213023 193 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm7065-201ENSMUST00000222150 474 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gm23454-201ENSMUST00000083332 133 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Mir302d-201ENSMUST00000083513 66 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.88□□□□□ -1.95
Ccdc9Q8VC31 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm24172-201ENSMUST00000104127 117 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22494-201ENSMUST00000104495 128 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22321-201ENSMUST00000157152 104 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22098-201ENSMUST00000157930 85 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm24958-201ENSMUST00000158009 97 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22447-201ENSMUST00000158155 92 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm26214-201ENSMUST00000158581 107 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22011-201ENSMUST00000158790 123 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm23197-201ENSMUST00000158809 112 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm25175-201ENSMUST00000178712 79 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm23922-201ENSMUST00000178792 79 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm24657-201ENSMUST00000180085 79 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm22996-201ENSMUST00000180236 79 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm37162-201ENSMUST00000191708 551 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm25814-201ENSMUST00000082754 107 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Gm23239-201ENSMUST00000083006 181 ntBASIC2.87□□□□□ -1.95
Ccdc9Q8VC31 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm25500-201ENSMUST00000104426 123 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm22496-201ENSMUST00000104493 88 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm23184-201ENSMUST00000122594 131 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm25283-201ENSMUST00000157272 77 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm22141-201ENSMUST00000157403 277 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm17166-201ENSMUST00000172006 431 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm25121-201ENSMUST00000179846 79 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm22062-201ENSMUST00000082563 107 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm25930-201ENSMUST00000082785 107 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm23517-201ENSMUST00000082830 192 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm25402-201ENSMUST00000082966 131 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.86□□□□□ -1.95
Ccdc9Q8VC31 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm15760-201ENSMUST00000119553 283 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm22027-201ENSMUST00000122737 127 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm16355-201ENSMUST00000128606 231 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm23982-201ENSMUST00000157141 106 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm24291-201ENSMUST00000157633 162 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm24770-201ENSMUST00000158505 92 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm25716-201ENSMUST00000158628 104 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm26337-201ENSMUST00000178000 79 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm29429-201ENSMUST00000187071 121 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm34314-201ENSMUST00000203622 367 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm24616-201ENSMUST00000083274 139 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm23138-201ENSMUST00000083365 103 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Ccdc9Q8VC31 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Mir344c-201ENSMUST00000103919 92 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm24263-201ENSMUST00000104059 107 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm14748-201ENSMUST00000119819 411 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm11785-201ENSMUST00000120165 601 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm14922-201ENSMUST00000121131 163 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm24839-201ENSMUST00000122602 107 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm25961-201ENSMUST00000157174 135 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm25280-201ENSMUST00000157269 101 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm22611-201ENSMUST00000158288 150 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm22606-201ENSMUST00000158290 103 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Mir3965-201ENSMUST00000175570 69 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm44320-201ENSMUST00000199276 86 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Gm25987-201ENSMUST00000083234 107 ntBASIC2.84□□□□□ -1.95
Ccdc9Q8VC31 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
Ccdc9Q8VC31 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Ccdc9Q8VC31 Gm12550-201ENSMUST00000118478 329 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm23466-201ENSMUST00000157133 106 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm24885-201ENSMUST00000158783 270 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm16561-201ENSMUST00000163001 192 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Mir6916-201ENSMUST00000184514 63 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm28627-201ENSMUST00000186141 453 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.83□□□□□ -1.96
Ccdc9Q8VC31 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.82□□□□□ -1.96
Ccdc9Q8VC31 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.82□□□□□ -1.96
Ccdc9Q8VC31 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ccdc9Q8VC31 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ccdc9Q8VC31 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms