Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm22978-201ENSMUST00000082607 160 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm26494-201ENSMUST00000083154 143 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm24493-201ENSMUST00000083805 143 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 Gm24163-201ENSMUST00000093660 132 ntBASIC2.96□□□□□ -1.94
Ushbp1Q8R370 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm25945-201ENSMUST00000122484 135 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm24075-201ENSMUST00000158175 72 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm27476-201ENSMUST00000183366 104 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm27271-201ENSMUST00000183509 170 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Trbv18-201ENSMUST00000194256 294 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm44478-201ENSMUST00000204875 114 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm45543-201ENSMUST00000209327 88 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm18346-201ENSMUST00000216782 325 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ushbp1Q8R370 Gm25863-201ENSMUST00000158249 329 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm25015-201ENSMUST00000158400 128 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Mir7013-201ENSMUST00000183540 72 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm43220-201ENSMUST00000199299 282 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm18617-201ENSMUST00000222311 259 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm23678-201ENSMUST00000083157 107 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm23847-201ENSMUST00000083829 110 ntBASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.94□□□□□ -1.94
Ushbp1Q8R370 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm22713-201ENSMUST00000116895 130 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm6829-201ENSMUST00000119858 360 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm24291-201ENSMUST00000157633 162 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Mir8103-201ENSMUST00000183945 107 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm37807-201ENSMUST00000194310 190 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm24698-201ENSMUST00000083883 130 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.93□□□□□ -1.94
Ushbp1Q8R370 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm26249-201ENSMUST00000116708 118 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm14602-201ENSMUST00000118625 340 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm23466-201ENSMUST00000157133 106 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm26411-201ENSMUST00000157668 107 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm22097-201ENSMUST00000157929 278 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm25012-201ENSMUST00000158396 164 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm25020-201ENSMUST00000178071 107 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm22348-201ENSMUST00000178674 79 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm42774-201ENSMUST00000198854 283 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm20144-201ENSMUST00000203031 165 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ushbp1Q8R370 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.92□□□□□ -1.94
Ushbp1Q8R370 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Mir669d-201ENSMUST00000104644 121 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm16032-201ENSMUST00000118534 168 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm25476-201ENSMUST00000175125 185 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm22800-201ENSMUST00000175627 94 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm44903-201ENSMUST00000206840 130 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Gm24355-201ENSMUST00000082858 122 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Mir471-201ENSMUST00000093596 67 ntBASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ushbp1Q8R370 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Ushbp1Q8R370 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Ushbp1Q8R370 Snord19-201ENSMUST00000104609 76 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Gm15365-201ENSMUST00000122392 300 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Snord11-201ENSMUST00000158468 84 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Gm27959-201ENSMUST00000185172 111 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Gm22622-201ENSMUST00000082870 129 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Snord82-201ENSMUST00000082889 70 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Gm23246-201ENSMUST00000083371 67 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.9□□□□□ -1.95
Ushbp1Q8R370 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.9□□□□□ -1.95
Ushbp1Q8R370 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Mir682-201ENSMUST00000102281 96 ntBASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Gm22678-201ENSMUST00000116974 101 ntBASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Gm24304-201ENSMUST00000177635 107 ntBASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Gm44555-201ENSMUST00000209008 148 ntBASIC2.89□□□□□ -1.95
Ushbp1Q8R370 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm26341-201ENSMUST00000104561 134 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm13885-201ENSMUST00000117569 187 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm12351-201ENSMUST00000118727 292 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm11204-201ENSMUST00000122438 147 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm26105-201ENSMUST00000157253 190 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Gm23381-201ENSMUST00000157676 94 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Mir28b-201ENSMUST00000175399 80 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms