Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm15215-201ENSMUST00000117773 489 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm12042-201ENSMUST00000120479 301 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm22321-201ENSMUST00000157152 104 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm26406-201ENSMUST00000158503 124 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm22947-201ENSMUST00000158559 91 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Mir466e-201ENSMUST00000198862 84 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Mir1291-201ENSMUST00000199842 117 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm44666-201ENSMUST00000208544 391 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm22299-201ENSMUST00000082663 136 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm22358-201ENSMUST00000082877 122 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Snora34-201ENSMUST00000083402 138 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm25188-201ENSMUST00000083913 122 ntBASIC2.59□□□□□ -1.99
Syne4Q8CII8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.59□□□□□ -1.99
Syne4Q8CII8 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.59□□□□□ -2
Syne4Q8CII8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Syne4Q8CII8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.58□□□□□ -2
Syne4Q8CII8 Mir1936-201ENSMUST00000158699 93 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Syne4Q8CII8 Mir28b-201ENSMUST00000175399 80 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm7958-201ENSMUST00000178255 468 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm7950-201ENSMUST00000179633 468 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm25253-201ENSMUST00000179958 107 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm27793-201ENSMUST00000183405 76 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm44482-201ENSMUST00000199232 103 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm43220-201ENSMUST00000199299 282 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm45543-201ENSMUST00000209327 88 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm45365-201ENSMUST00000209489 256 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm5899-201ENSMUST00000071770 270 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Gm25789-201ENSMUST00000083294 76 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Rny1-201ENSMUST00000083767 112 ntBASIC2.58□□□□□ -2
Syne4Q8CII8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Syne4Q8CII8 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Syne4Q8CII8 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Syne4Q8CII8 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Syne4Q8CII8 Gm24010-201ENSMUST00000157731 282 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Gm27402-201ENSMUST00000183890 120 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Gm28453-203ENSMUST00000187041 189 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Mir7215-201ENSMUST00000200383 51 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Gm25636-201ENSMUST00000082666 133 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.57□□□□□ -2
Syne4Q8CII8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Syne4Q8CII8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.57□□□□□ -2
Syne4Q8CII8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Syne4Q8CII8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm22883-201ENSMUST00000157376 106 ntBASIC2.56□□□□□ -2
Syne4Q8CII8 Mir7225-201ENSMUST00000184178 54 ntBASIC2.56□□□□□ -2
Syne4Q8CII8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm37089-201ENSMUST00000195616 129 ntBASIC2.56□□□□□ -2
Syne4Q8CII8 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.56□□□□□ -2
Syne4Q8CII8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm24164-201ENSMUST00000093663 104 ntBASIC2.56□□□□□ -2
Syne4Q8CII8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Syne4Q8CII8 Gm24423-201ENSMUST00000101982 106 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm22486-201ENSMUST00000116815 137 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm22551-201ENSMUST00000157795 103 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm26287-201ENSMUST00000158887 81 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Snora15-201ENSMUST00000177461 131 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Mir6336-201ENSMUST00000183581 130 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm27545-201ENSMUST00000184755 202 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm25820-201ENSMUST00000198589 127 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Syne4Q8CII8 Gm24625-201ENSMUST00000082622 130 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Gm24977-201ENSMUST00000083106 163 ntBASIC2.55□□□□□ -2
Syne4Q8CII8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Syne4Q8CII8 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm24374-201ENSMUST00000104394 106 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm14922-201ENSMUST00000121131 163 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm7209-201ENSMUST00000122339 333 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm25664-201ENSMUST00000157697 107 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm22535-201ENSMUST00000158174 119 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm25711-201ENSMUST00000158633 128 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Mir6353-201ENSMUST00000183596 113 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm37579-201ENSMUST00000194291 142 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Mir7116-201ENSMUST00000195956 70 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm44564-201ENSMUST00000207985 180 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.54□□□□□ -2
Syne4Q8CII8 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm24966-201ENSMUST00000082443 79 ntBASIC2.54□□□□□ -2
Syne4Q8CII8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.54□□□□□ -2
Syne4Q8CII8 Gm12417-201ENSMUST00000119153 403 ntBASIC2.53□□□□□ -2
Syne4Q8CII8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.53□□□□□ -2
Syne4Q8CII8 Gm23289-201ENSMUST00000175615 108 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 146.4 ms