Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26265-202ENSMUST00000196326 133 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm44393-201ENSMUST00000197418 138 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Mir222-201ENSMUST00000083537 79 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm12351-201ENSMUST00000118727 292 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm11786-201ENSMUST00000120799 155 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22321-201ENSMUST00000157152 104 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22537-201ENSMUST00000158172 199 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22159-201ENSMUST00000158412 130 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27532-201ENSMUST00000183726 113 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm28627-201ENSMUST00000186141 453 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm29005-201ENSMUST00000186773 320 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Gm37778-201ENSMUST00000191732 190 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Mir497-201ENSMUST00000200557 84 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc28bQ8CEG5 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24423-201ENSMUST00000101982 106 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Mir344c-201ENSMUST00000103919 92 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Mir1193-201ENSMUST00000116761 121 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm15215-201ENSMUST00000117773 489 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm12926-201ENSMUST00000121158 409 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm23640-201ENSMUST00000157860 104 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22386-201ENSMUST00000158192 129 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm26287-201ENSMUST00000158887 81 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm17161-201ENSMUST00000169187 524 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24656-201ENSMUST00000177548 132 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm17067-202ENSMUST00000180131 123 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Mir7047-201ENSMUST00000184595 64 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27540-201ENSMUST00000184950 187 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27979-201ENSMUST00000185126 56 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm19901-201ENSMUST00000192191 495 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm25589-201ENSMUST00000082502 166 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24151-201ENSMUST00000082758 141 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc28bQ8CEG5 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm12815-201ENSMUST00000121737 135 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm14846-201ENSMUST00000121868 216 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm23982-201ENSMUST00000157141 106 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Mir7k-201ENSMUST00000184115 110 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27545-201ENSMUST00000184755 202 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm28282-201ENSMUST00000186072 186 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm43587-201ENSMUST00000199590 204 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm46997-201ENSMUST00000222108 217 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc28bQ8CEG5 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm24098-201ENSMUST00000102075 109 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25381-201ENSMUST00000102078 109 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm15067-201ENSMUST00000119534 156 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm12686-201ENSMUST00000120546 397 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25059-201ENSMUST00000157367 117 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm24480-201ENSMUST00000157442 103 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 U6.1-201ENSMUST00000157443 101 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25066-201ENSMUST00000158145 123 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25012-201ENSMUST00000158396 164 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Mir3075-201ENSMUST00000175340 85 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm20144-201ENSMUST00000203031 165 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm43865-201ENSMUST00000204721 127 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25124-201ENSMUST00000083345 164 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Mir127-201ENSMUST00000093568 70 ntBASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Ccdc28bQ8CEG5 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm22603-201ENSMUST00000157603 96 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25658-201ENSMUST00000158472 128 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25051-201ENSMUST00000158602 249 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm24816-201ENSMUST00000175311 151 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm25749-201ENSMUST00000175485 111 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm27793-201ENSMUST00000183405 76 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Mir6336-201ENSMUST00000183581 130 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.89□□□□□ -2.11
Ccdc28bQ8CEG5 Gm6796-201ENSMUST00000211919 243 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms