Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25825-201ENSMUST00000157091 124 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm22228-201ENSMUST00000157364 101 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm24056-201ENSMUST00000158617 146 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm24739-201ENSMUST00000158855 292 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm42739-201ENSMUST00000200687 226 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm23727-201ENSMUST00000083352 164 ntBASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim47Q8C0E3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Gm24946-201ENSMUST00000158332 106 ntBASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Gm28912-201ENSMUST00000189001 234 ntBASIC3.86□□□□□ -1.79
Trim47Q8C0E3 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Gm22354-201ENSMUST00000083919 70 ntBASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.86□□□□□ -1.79
Trim47Q8C0E3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm25091-201ENSMUST00000103997 71 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm14567-201ENSMUST00000117155 174 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm25323-201ENSMUST00000122555 103 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm23253-201ENSMUST00000157441 104 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm23053-201ENSMUST00000175136 96 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm28591-201ENSMUST00000185259 183 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm6060-201ENSMUST00000188671 251 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Gm26493-201ENSMUST00000083155 136 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Mir7-1-201ENSMUST00000083500 108 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Mir137-201ENSMUST00000083635 73 ntBASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim47Q8C0E3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm24468-201ENSMUST00000104489 104 ntBASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm25438-201ENSMUST00000158281 110 ntBASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Mir28b-201ENSMUST00000175399 80 ntBASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.84□□□□□ -1.79
Trim47Q8C0E3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm24099-201ENSMUST00000083384 107 ntBASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim47Q8C0E3 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.84□□□□□ -1.8
Trim47Q8C0E3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Gm23654-201ENSMUST00000116758 126 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Gm7123-201ENSMUST00000117647 213 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Gm25491-201ENSMUST00000158733 308 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Gm23476-201ENSMUST00000158881 274 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim47Q8C0E3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Gm3788-201ENSMUST00000119949 136 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Gm13588-201ENSMUST00000120026 135 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Gm8034-201ENSMUST00000178853 132 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Gm10025-201ENSMUST00000079568 372 ntBASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim47Q8C0E3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm24930-201ENSMUST00000158315 83 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm25978-201ENSMUST00000158698 90 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Mir6715-201ENSMUST00000184990 57 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.81□□□□□ -1.8
Trim47Q8C0E3 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms