Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 Gm23848-201ENSMUST00000083826 106 ntBASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Col16a1Q8BLX7 Gm26377-201ENSMUST00000102184 108 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Mir487b-201ENSMUST00000102265 82 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Mir672-201ENSMUST00000102331 100 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm24833-201ENSMUST00000116775 120 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm23387-201ENSMUST00000158586 107 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm24137-201ENSMUST00000180055 79 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm22391-201ENSMUST00000180356 79 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm27289-201ENSMUST00000183341 82 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm29216-201ENSMUST00000187117 492 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm44491-201ENSMUST00000196794 96 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm44449-201ENSMUST00000203610 153 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Gm6607-201ENSMUST00000215035 328 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Col16a1Q8BLX7 Mir883a-201ENSMUST00000104824 76 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm14359-201ENSMUST00000118883 424 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm24892-201ENSMUST00000122747 104 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm15274-201ENSMUST00000131442 291 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm21979-201ENSMUST00000139887 291 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm9498-201ENSMUST00000140849 291 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm14368-201ENSMUST00000145305 415 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm15259-201ENSMUST00000151262 291 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Mir3079-201ENSMUST00000175428 90 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm44921-201ENSMUST00000205290 301 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Mir214-201ENSMUST00000083582 110 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Mir324-201ENSMUST00000083600 89 ntBASIC0.04□□□□□ -2.4
Col16a1Q8BLX7 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Mir670-201ENSMUST00000102380 100 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Gm25294-201ENSMUST00000122791 104 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Mir3964-201ENSMUST00000174898 74 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Gm27676-201ENSMUST00000183669 61 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Gm38208-201ENSMUST00000192476 114 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Gm44455-201ENSMUST00000200061 82 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Col16a1Q8BLX7 Gm12102-201ENSMUST00000118251 604 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm8858-201ENSMUST00000118259 342 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm24836-201ENSMUST00000122609 108 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Snora16a-202ENSMUST00000196061 137 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm43898-201ENSMUST00000204456 424 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm44554-201ENSMUST00000208738 147 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm19855-201ENSMUST00000210145 249 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm25952-201ENSMUST00000175329 74 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Mir3108-201ENSMUST00000175500 79 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm27943-201ENSMUST00000184844 116 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm5116-201ENSMUST00000187732 463 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm6003-201ENSMUST00000187903 463 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm29627-201ENSMUST00000187984 463 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm37727-201ENSMUST00000191637 819 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm34073-201ENSMUST00000195736 212 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
Col16a1Q8BLX7 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm14887-201ENSMUST00000119522 663 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm25334-201ENSMUST00000158036 110 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm2962-201ENSMUST00000159266 336 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm25956-201ENSMUST00000175115 217 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm22114-201ENSMUST00000177756 107 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm28257-201ENSMUST00000185244 463 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm28921-201ENSMUST00000190219 378 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm5010-201ENSMUST00000213131 260 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm26446-201ENSMUST00000082455 103 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm23690-201ENSMUST00000083036 94 ntBASIC0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm28666-201ENSMUST00000186649 274 ntBASIC0□□□□□ -2.41
Col16a1Q8BLX7 AC113305.1-201ENSMUST00000214664 724 ntBASIC0□□□□□ -2.41
Col16a1Q8BLX7 AC122341.1-201ENSMUST00000227291 560 ntBASIC0□□□□□ -2.41
Col16a1Q8BLX7 AC163295.1-201ENSMUST00000227840 314 ntBASIC0□□□□□ -2.41
Col16a1Q8BLX7 Gm24456-201ENSMUST00000083198 107 ntBASIC0□□□□□ -2.41
Col16a1Q8BLX7 Gm12016-201ENSMUST00000119079 681 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm15266-201ENSMUST00000119635 255 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm24481-201ENSMUST00000157210 102 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms