Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Shkbp1Q6P7W2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Mir669b-201ENSMUST00000102172 97 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm24283-201ENSMUST00000104233 107 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm22148-201ENSMUST00000104445 107 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm14448-201ENSMUST00000116383 210 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm12954-201ENSMUST00000118610 611 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm11786-201ENSMUST00000120799 155 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm23183-201ENSMUST00000122595 323 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm22557-201ENSMUST00000157804 102 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm22967-201ENSMUST00000157956 239 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm25267-201ENSMUST00000158522 63 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm23476-201ENSMUST00000158881 274 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm22192-201ENSMUST00000175128 85 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm25457-201ENSMUST00000179509 107 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Mir7013-201ENSMUST00000183540 72 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Mir6399-201ENSMUST00000184050 84 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm25142-201ENSMUST00000082698 107 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm25632-201ENSMUST00000083112 85 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm25987-201ENSMUST00000083234 107 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Mir137-201ENSMUST00000083635 73 ntBASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Shkbp1Q6P7W2 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm23202-201ENSMUST00000104376 129 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm12351-201ENSMUST00000118727 292 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm12143-201ENSMUST00000119666 332 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm27396-201ENSMUST00000157708 58 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm22966-201ENSMUST00000157957 129 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm24601-201ENSMUST00000157970 143 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm27793-201ENSMUST00000183405 76 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm29553-201ENSMUST00000189692 279 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm4945-201ENSMUST00000075152 453 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm22248-201ENSMUST00000082482 150 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm25856-201ENSMUST00000082786 75 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm23738-201ENSMUST00000082828 171 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.85□□□□□ -1.95
Shkbp1Q6P7W2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm22051-201ENSMUST00000117002 127 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm7123-201ENSMUST00000117647 213 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm13922-201ENSMUST00000119505 156 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm22521-201ENSMUST00000158272 134 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm23337-201ENSMUST00000158959 118 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm23963-201ENSMUST00000179603 77 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Trbv7-201ENSMUST00000193339 402 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm45445-201ENSMUST00000209586 232 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm5010-201ENSMUST00000213131 260 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm22421-201ENSMUST00000083058 107 ntBASIC2.84□□□□□ -1.95
Shkbp1Q6P7W2 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.84□□□□□ -1.96
Shkbp1Q6P7W2 Gm22373-201ENSMUST00000104584 89 ntBASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 Gm22713-201ENSMUST00000116895 130 ntBASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 Mir7068-201ENSMUST00000183439 74 ntBASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.83□□□□□ -1.96
Shkbp1Q6P7W2 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm26135-201ENSMUST00000101993 72 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Mir682-201ENSMUST00000102281 96 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm23320-201ENSMUST00000104462 127 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm24274-201ENSMUST00000116787 124 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm11334-201ENSMUST00000121969 156 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm7592-201ENSMUST00000160674 627 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Snord50b-201ENSMUST00000178497 72 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm43993-201ENSMUST00000203972 247 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm25136-201ENSMUST00000083253 115 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Mir488-201ENSMUST00000093595 109 ntBASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Shkbp1Q6P7W2 Gm22553-201ENSMUST00000157797 295 ntBASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Gm17161-201ENSMUST00000169187 524 ntBASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Gm43264-201ENSMUST00000202284 325 ntBASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.81□□□□□ -1.96
Shkbp1Q6P7W2 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm15861-201ENSMUST00000120979 339 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm24061-201ENSMUST00000157489 120 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms