Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm24274-201ENSMUST00000116787 124 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gm27465-201ENSMUST00000184290 91 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gm28900-201ENSMUST00000185232 156 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gm25204-201ENSMUST00000082843 106 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gm22973-201ENSMUST00000083298 191 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gm10360-201ENSMUST00000097219 272 ntBASIC3.36□□□□□ -1.87
Best3Q6H1V1 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Best3Q6H1V1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Best3Q6H1V1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Best3Q6H1V1 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm22482-201ENSMUST00000122563 359 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm23324-201ENSMUST00000157421 131 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm22535-201ENSMUST00000158174 119 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm17113-201ENSMUST00000170118 171 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm25476-201ENSMUST00000175125 185 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Mir5118-201ENSMUST00000175551 67 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm23963-201ENSMUST00000179603 77 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm43427-201ENSMUST00000198188 331 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Gm26175-201ENSMUST00000083794 131 ntBASIC3.35□□□□□ -1.87
Best3Q6H1V1 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Best3Q6H1V1 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm22750-201ENSMUST00000102076 103 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm14491-201ENSMUST00000121919 199 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm42807-201ENSMUST00000200141 329 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm45456-201ENSMUST00000210841 243 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Snora19-201ENSMUST00000082962 132 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm26493-201ENSMUST00000083155 136 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Gm23658-201ENSMUST00000083233 132 ntBASIC3.34□□□□□ -1.87
Best3Q6H1V1 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Best3Q6H1V1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm25707-201ENSMUST00000175120 96 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Mir669k-201ENSMUST00000177742 127 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm25673-201ENSMUST00000179957 127 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Mir384-201ENSMUST00000083565 88 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Mir29c-201ENSMUST00000083614 88 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.33□□□□□ -1.88
Best3Q6H1V1 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.33□□□□□ -1.88
Best3Q6H1V1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Gm24358-201ENSMUST00000158424 288 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Gm22911-201ENSMUST00000177920 107 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Gm27699-201ENSMUST00000183553 180 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Gm26458-201ENSMUST00000082832 128 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Best3Q6H1V1 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.32□□□□□ -1.88
Best3Q6H1V1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Best3Q6H1V1 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm15861-201ENSMUST00000120979 339 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm13797-201ENSMUST00000121792 120 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm22011-201ENSMUST00000158790 123 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm37007-201ENSMUST00000194234 319 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm34139-201ENSMUST00000196166 294 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm18617-201ENSMUST00000222311 259 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm9174-201ENSMUST00000078149 255 ntBASIC3.31□□□□□ -1.88
Best3Q6H1V1 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Best3Q6H1V1 Gm22935-201ENSMUST00000103960 104 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm23015-201ENSMUST00000104145 128 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm26342-201ENSMUST00000104557 129 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm23803-201ENSMUST00000104610 132 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm11285-201ENSMUST00000118443 322 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm24750-201ENSMUST00000157843 104 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm26024-201ENSMUST00000158657 322 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm11351-202ENSMUST00000225724 478 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Best3Q6H1V1 Gm24615-201ENSMUST00000083268 113 ntBASIC3.3□□□□□ -1.88
Best3Q6H1V1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.29□□□□□ -1.88
Best3Q6H1V1 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best3Q6H1V1 Mir682-201ENSMUST00000102281 96 ntBASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm25485-201ENSMUST00000104120 132 ntBASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best3Q6H1V1 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm27796-201ENSMUST00000183863 261 ntBASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm37377-201ENSMUST00000191733 304 ntBASIC3.29□□□□□ -1.88
Best3Q6H1V1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.29□□□□□ -1.88
Best3Q6H1V1 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms