Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm11644-201ENSMUST00000119735 150 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm3788-201ENSMUST00000119949 136 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm12412-201ENSMUST00000121867 328 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm26020-201ENSMUST00000122729 183 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm22281-201ENSMUST00000157198 103 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm25623-201ENSMUST00000157216 108 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24138-201ENSMUST00000157572 114 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24747-201ENSMUST00000157835 87 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24601-201ENSMUST00000157970 143 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Mir1936-201ENSMUST00000158699 93 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24388-201ENSMUST00000177872 107 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Mir6993-201ENSMUST00000184912 65 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm42739-201ENSMUST00000200687 226 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Gm22950-201ENSMUST00000082776 107 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Snord61-201ENSMUST00000083176 71 ntBASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
Sh3rf1Q69ZI1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Mir291a-201ENSMUST00000104815 82 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm15733-201ENSMUST00000132957 242 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm23775-201ENSMUST00000158991 249 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm27869-201ENSMUST00000184327 122 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm37281-201ENSMUST00000192412 439 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm43324-201ENSMUST00000197482 289 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Gm11351-202ENSMUST00000225724 478 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm14491-201ENSMUST00000121919 199 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm22558-201ENSMUST00000157326 95 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24842-201ENSMUST00000158681 54 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm22708-201ENSMUST00000158987 103 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Mir3106-201ENSMUST00000175401 82 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm18665-201ENSMUST00000189783 270 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm43264-201ENSMUST00000202284 325 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm44564-201ENSMUST00000207985 180 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm44600-201ENSMUST00000208540 111 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24625-201ENSMUST00000082622 130 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm23038-201ENSMUST00000083873 104 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm24118-201ENSMUST00000103972 126 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm25376-201ENSMUST00000104340 133 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm11598-201ENSMUST00000119257 357 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm23504-201ENSMUST00000158988 95 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm27668-201ENSMUST00000184188 120 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.28□□□□□ -1.88
Sh3rf1Q69ZI1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Sh3rf1Q69ZI1 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.28□□□□□ -1.89
Sh3rf1Q69ZI1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm15214-201ENSMUST00000122155 470 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm23476-201ENSMUST00000158881 274 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm22910-201ENSMUST00000178568 132 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm25253-201ENSMUST00000179958 107 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm22683-201ENSMUST00000082854 137 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Gm22055-201ENSMUST00000083388 107 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sh3rf1Q69ZI1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms