Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mir340-201ENSMUST00000083483 98 ntBASIC1.85□□□□□ -2.11
Sdc3Q64519 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Sdc3Q64519 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc3Q64519 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Sdc3Q64519 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Gm23048-201ENSMUST00000157237 129 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Gm22221-201ENSMUST00000157362 103 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Mir3569-201ENSMUST00000185080 58 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Gm18546-201ENSMUST00000197245 676 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Gm43512-201ENSMUST00000198495 176 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Gm45616-201ENSMUST00000211711 319 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.84□□□□□ -2.11
Sdc3Q64519 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Sdc3Q64519 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm12417-201ENSMUST00000119153 403 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm25805-201ENSMUST00000122788 108 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm23535-201ENSMUST00000157542 106 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm22216-201ENSMUST00000157557 114 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm24858-201ENSMUST00000158058 323 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm23759-201ENSMUST00000158351 268 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm22768-201ENSMUST00000158366 153 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm26402-201ENSMUST00000158499 113 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm22448-201ENSMUST00000179254 107 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm25253-201ENSMUST00000179958 107 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Mir6901-201ENSMUST00000185062 62 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29512-201ENSMUST00000185544 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28110-201ENSMUST00000185782 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29057-201ENSMUST00000186468 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29661-201ENSMUST00000186781 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28737-201ENSMUST00000186808 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29118-201ENSMUST00000186908 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28433-201ENSMUST00000187085 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28759-201ENSMUST00000187621 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28831-201ENSMUST00000187739 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28200-201ENSMUST00000187778 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28752-201ENSMUST00000188340 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29378-201ENSMUST00000188723 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28569-201ENSMUST00000188748 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28120-201ENSMUST00000188812 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28369-201ENSMUST00000188993 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29037-201ENSMUST00000189092 313 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28909-201ENSMUST00000189406 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm28861-201ENSMUST00000189681 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29180-201ENSMUST00000190003 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29167-201ENSMUST00000190024 377 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29575-201ENSMUST00000190597 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm29469-201ENSMUST00000191448 315 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm43993-201ENSMUST00000203972 247 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm25078-201ENSMUST00000082530 107 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm22972-201ENSMUST00000083297 131 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Mir429-201ENSMUST00000083493 83 ntBASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Sdc3Q64519 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Sdc3Q64519 Gm25421-201ENSMUST00000104218 164 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm11854-201ENSMUST00000117839 446 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm23214-201ENSMUST00000122716 157 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm24630-201ENSMUST00000122768 106 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm23230-201ENSMUST00000157298 133 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm23043-201ENSMUST00000157890 109 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Mir669n-201ENSMUST00000158636 54 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Mir5624-201ENSMUST00000176635 61 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm29665-201ENSMUST00000191457 528 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.82□□□□□ -2.12
Sdc3Q64519 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Gm25793-201ENSMUST00000083287 107 ntBASIC1.82□□□□□ -2.12
Sdc3Q64519 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Sdc3Q64519 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm15526-201ENSMUST00000112504 204 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm24629-201ENSMUST00000122762 89 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm23670-201ENSMUST00000157469 119 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm23090-201ENSMUST00000177331 78 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm23406-201ENSMUST00000082537 122 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 Gm23845-201ENSMUST00000083834 152 ntBASIC1.81□□□□□ -2.12
Sdc3Q64519 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm24079-201ENSMUST00000104352 132 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm11322-201ENSMUST00000118095 435 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm22217-201ENSMUST00000157556 313 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm25836-201ENSMUST00000158918 123 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Snord87-201ENSMUST00000175437 87 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm21885-201ENSMUST00000178891 327 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm25450-201ENSMUST00000179144 107 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm5900-201ENSMUST00000179862 375 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm29147-201ENSMUST00000186846 315 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm29227-201ENSMUST00000187139 315 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm29034-201ENSMUST00000188099 315 ntBASIC1.8□□□□□ -2.12
Sdc3Q64519 Gm28160-201ENSMUST00000191229 315 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms