Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trim28Q62318 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim28Q62318 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim28Q62318 Gm13432-201ENSMUST00000118861 241 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm12213-201ENSMUST00000119924 353 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim28Q62318 Gm26099-201ENSMUST00000157248 109 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm22560-201ENSMUST00000157332 120 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm9377-201ENSMUST00000207227 623 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Gm24152-201ENSMUST00000082764 163 ntBASIC3.18□□□□□ -1.9
Trim28Q62318 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim28Q62318 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim28Q62318 Gm24436-201ENSMUST00000157889 302 ntBASIC3.17□□□□□ -1.9
Trim28Q62318 Gm26157-201ENSMUST00000158974 126 ntBASIC3.17□□□□□ -1.9
Trim28Q62318 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.17□□□□□ -1.9
Trim28Q62318 Gm24799-201ENSMUST00000178431 79 ntBASIC3.17□□□□□ -1.9
Trim28Q62318 Gm23847-201ENSMUST00000083829 110 ntBASIC3.17□□□□□ -1.9
Trim28Q62318 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Trim28Q62318 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim28Q62318 Mir872-201ENSMUST00000104728 81 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim28Q62318 Gm22883-201ENSMUST00000157376 106 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm24358-201ENSMUST00000158424 288 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm26403-201ENSMUST00000158500 105 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Mir6402-201ENSMUST00000183406 80 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm29308-201ENSMUST00000188863 315 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm28537-201ENSMUST00000189026 315 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm29631-201ENSMUST00000191065 315 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm44337-201ENSMUST00000196553 114 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm42988-201ENSMUST00000198116 225 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim28Q62318 Gm44182-201ENSMUST00000204052 115 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Mir208a-201ENSMUST00000083498 83 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm25896-201ENSMUST00000083713 136 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Gm25257-201ENSMUST00000083907 110 ntBASIC3.16□□□□□ -1.9
Trim28Q62318 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim28Q62318 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Trim28Q62318 Gm25543-201ENSMUST00000122678 312 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim28Q62318 Gm23331-201ENSMUST00000157423 108 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Gm25457-201ENSMUST00000179509 107 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Gm27527-201ENSMUST00000183903 99 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Gm37361-201ENSMUST00000194345 132 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Mir378a-201ENSMUST00000198300 66 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim28Q62318 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Gm24449-201ENSMUST00000083985 106 ntBASIC3.15□□□□□ -1.91
Trim28Q62318 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim28Q62318 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim28Q62318 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Trim28Q62318 Gm24234-201ENSMUST00000104316 107 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm23536-201ENSMUST00000157541 134 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm26482-201ENSMUST00000158015 62 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm22139-201ENSMUST00000158747 105 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm16404-201ENSMUST00000177739 468 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm6660-201ENSMUST00000179149 468 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm14598-201ENSMUST00000180109 468 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm14625-201ENSMUST00000180231 468 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm27582-201ENSMUST00000184084 126 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm29005-201ENSMUST00000186773 320 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm24966-201ENSMUST00000082443 79 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Gm25136-201ENSMUST00000083253 115 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Trim28Q62318 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.14□□□□□ -1.91
Trim28Q62318 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim28Q62318 Gm22658-201ENSMUST00000104196 155 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Gm25424-201ENSMUST00000157612 58 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Gm38238-201ENSMUST00000194334 346 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Mir497-201ENSMUST00000200557 84 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim28Q62318 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Gm22620-201ENSMUST00000082700 133 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Gm26166-201ENSMUST00000083788 107 ntBASIC3.13□□□□□ -1.91
Trim28Q62318 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim28Q62318 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim28Q62318 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim28Q62318 Mir669b-201ENSMUST00000102172 97 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm24937-201ENSMUST00000122597 134 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm23713-201ENSMUST00000157353 70 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm22615-201ENSMUST00000158102 70 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm24771-201ENSMUST00000158508 137 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Mir1966-201ENSMUST00000158807 108 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm25020-201ENSMUST00000178071 107 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm28848-201ENSMUST00000189984 168 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim28Q62318 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim28Q62318 Gm24698-201ENSMUST00000083883 130 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm25628-201ENSMUST00000084002 105 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.12□□□□□ -1.91
Trim28Q62318 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim28Q62318 Gm26049-201ENSMUST00000157313 108 ntBASIC3.11□□□□□ -1.91
Trim28Q62318 Gm44338-201ENSMUST00000198614 110 ntBASIC3.11□□□□□ -1.91
Trim28Q62318 Gm43901-201ENSMUST00000203247 453 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms