Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Six4Q61321 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.12□□□□□ -2.23
Six4Q61321 Gm23614-201ENSMUST00000082598 107 ntBASIC1.12□□□□□ -2.23
Six4Q61321 Gm25579-201ENSMUST00000083407 106 ntBASIC1.12□□□□□ -2.23
Six4Q61321 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.12□□□□□ -2.23
Six4Q61321 Gm24252-201ENSMUST00000083700 132 ntBASIC1.12□□□□□ -2.23
Six4Q61321 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Six4Q61321 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Six4Q61321 Gm14803-201ENSMUST00000117163 361 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm12512-201ENSMUST00000119620 217 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm13729-201ENSMUST00000120328 406 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm25371-201ENSMUST00000158162 101 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Rnu7-201ENSMUST00000158458 62 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm22129-201ENSMUST00000179034 107 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm16399-201ENSMUST00000181423 219 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm45456-201ENSMUST00000210841 243 ntBASIC1.11□□□□□ -2.23
Six4Q61321 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.11□□□□□ -2.23
Six4Q61321 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.11□□□□□ -2.23
Six4Q61321 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.11□□□□□ -2.23
Six4Q61321 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Mir221-201ENSMUST00000083488 95 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Gm3867-201ENSMUST00000086108 279 ntBASIC1.11□□□□□ -2.23
Six4Q61321 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Six4Q61321 Mir872-201ENSMUST00000104728 81 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Six4Q61321 Gm11862-201ENSMUST00000119678 659 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm14937-201ENSMUST00000119709 208 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm11254-201ENSMUST00000122368 653 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm23656-201ENSMUST00000122626 112 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm23535-201ENSMUST00000157542 106 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Mir1967-201ENSMUST00000157789 82 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm22551-201ENSMUST00000157795 103 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm22164-201ENSMUST00000158413 106 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm26363-201ENSMUST00000158866 83 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm26200-201ENSMUST00000180273 79 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Mir6346-201ENSMUST00000183982 81 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm28200-201ENSMUST00000187778 315 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm29378-201ENSMUST00000188723 315 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm28909-201ENSMUST00000189406 315 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm44491-201ENSMUST00000196794 96 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Mir6962-201ENSMUST00000199512 63 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm38395-201ENSMUST00000199904 830 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm43993-201ENSMUST00000203972 247 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm45119-201ENSMUST00000207612 199 ntBASIC1.1□□□□□ -2.23
Six4Q61321 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.1□□□□□ -2.23
Six4Q61321 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.1□□□□□ -2.23
Six4Q61321 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.1□□□□□ -2.23
Six4Q61321 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Gm23041-201ENSMUST00000083868 106 ntBASIC1.1□□□□□ -2.23
Six4Q61321 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Six4Q61321 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
Six4Q61321 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Six4Q61321 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Six4Q61321 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Six4Q61321 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Six4Q61321 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Six4Q61321 Gm8121-201ENSMUST00000153583 499 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm23435-201ENSMUST00000157183 156 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm22435-201ENSMUST00000158552 128 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm25069-201ENSMUST00000175238 86 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm23191-201ENSMUST00000179147 107 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm29167-201ENSMUST00000190024 377 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Six4Q61321 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.09□□□□□ -2.23
Six4Q61321 Gm35736-201ENSMUST00000203681 313 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.09□□□□□ -2.23
Six4Q61321 Gm45704-201ENSMUST00000212582 403 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm33654-201ENSMUST00000221704 215 ntBASIC1.09□□□□□ -2.23
Six4Q61321 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Six4Q61321 Gm23627-201ENSMUST00000082459 107 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm22502-201ENSMUST00000082488 107 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm22977-201ENSMUST00000082615 107 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm24149-201ENSMUST00000082757 107 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Mir22-201ENSMUST00000083595 95 ntBASIC1.09□□□□□ -2.23
Six4Q61321 BC022960-201ENSMUST00000119987 1815 ntBASIC1.09□□□□□ -2.23
Six4Q61321 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.09□□□□□ -2.24
Six4Q61321 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.09□□□□□ -2.24
Six4Q61321 Gm9059-201ENSMUST00000118319 183 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm13992-201ENSMUST00000120558 156 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm22113-201ENSMUST00000158343 104 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm23208-201ENSMUST00000158666 127 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm25491-201ENSMUST00000158733 308 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm26435-201ENSMUST00000179026 107 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm23714-201ENSMUST00000179259 105 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm26180-201ENSMUST00000179942 107 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm29037-201ENSMUST00000189092 313 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.08□□□□□ -2.24
Six4Q61321 Gm36953-201ENSMUST00000195295 268 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.08□□□□□ -2.24
Six4Q61321 Gm44465-201ENSMUST00000199536 114 ntBASIC1.08□□□□□ -2.24
Six4Q61321 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.08□□□□□ -2.24
Six4Q61321 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms