Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.91□□□□□ -2.26
Trav3-3Q5R1C3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm13967-201ENSMUST00000120404 380 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm23169-201ENSMUST00000157157 112 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm27793-201ENSMUST00000183405 76 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Mir6917-201ENSMUST00000184111 61 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm28257-201ENSMUST00000185244 463 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm37162-201ENSMUST00000191708 551 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm37918-201ENSMUST00000192071 120 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm20102-201ENSMUST00000222445 220 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Snora41-201ENSMUST00000082668 132 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Gm24150-201ENSMUST00000082759 104 ntBASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trav3-3Q5R1C3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm26074-201ENSMUST00000104063 129 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm14923-201ENSMUST00000118270 155 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm22929-201ENSMUST00000175517 107 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm17067-202ENSMUST00000180131 123 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm9227-201ENSMUST00000194733 566 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm9251-201ENSMUST00000197202 628 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm44726-201ENSMUST00000203427 217 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Gm44010-201ENSMUST00000204432 331 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.89□□□□□ -2.27
Trav3-3Q5R1C3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm23836-201ENSMUST00000104434 129 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm14296-202ENSMUST00000108931 750 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm24588-201ENSMUST00000116696 83 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm13588-201ENSMUST00000120026 135 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm22073-201ENSMUST00000122668 189 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm15899-201ENSMUST00000128586 238 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm25392-201ENSMUST00000157335 297 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm23670-201ENSMUST00000157469 119 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm26213-201ENSMUST00000158582 110 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm24177-201ENSMUST00000158927 131 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm2962-201ENSMUST00000159266 336 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm24799-201ENSMUST00000178431 79 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm38041-201ENSMUST00000194445 661 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm36953-201ENSMUST00000195295 268 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm26164-201ENSMUST00000083793 104 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm25683-201ENSMUST00000083940 131 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.88□□□□□ -2.27
Trav3-3Q5R1C3 Gm26339-201ENSMUST00000102368 99 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm26049-201ENSMUST00000157313 108 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm22233-201ENSMUST00000157464 114 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm23122-201ENSMUST00000157645 103 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm25663-201ENSMUST00000157698 135 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm25868-201ENSMUST00000158253 114 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm24618-201ENSMUST00000177718 94 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm23953-201ENSMUST00000178214 94 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm26332-201ENSMUST00000179813 94 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm22863-201ENSMUST00000180265 94 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm26200-201ENSMUST00000180273 79 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm27271-201ENSMUST00000183509 170 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Mir6346-201ENSMUST00000183982 81 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Mir7017-201ENSMUST00000184894 62 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm20257-202ENSMUST00000188643 130 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm42834-201ENSMUST00000196845 256 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm45296-201ENSMUST00000209625 205 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm11351-202ENSMUST00000225724 478 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm24038-201ENSMUST00000082872 159 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 Gm25789-201ENSMUST00000083294 76 ntBASIC0.87□□□□□ -2.27
Trav3-3Q5R1C3 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm25434-201ENSMUST00000158278 167 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm22113-201ENSMUST00000158343 104 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm20144-201ENSMUST00000203031 165 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm25579-201ENSMUST00000083407 106 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm24261-201ENSMUST00000083744 104 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm23041-201ENSMUST00000083868 106 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.86□□□□□ -2.27
Trav3-3Q5R1C3 Mir301b-201ENSMUST00000102333 97 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm23010-201ENSMUST00000104151 126 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm12143-201ENSMUST00000119666 332 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm22477-201ENSMUST00000122569 316 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm26089-201ENSMUST00000157898 107 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm22435-201ENSMUST00000158552 128 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm24277-201ENSMUST00000158661 104 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms