Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm12304-201ENSMUST00000120312 385 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm22883-201ENSMUST00000157376 106 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm22336-201ENSMUST00000157719 107 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm24750-201ENSMUST00000157843 104 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm25834-201ENSMUST00000158916 101 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Snord93-201ENSMUST00000175580 71 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm24388-201ENSMUST00000177872 107 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm27761-201ENSMUST00000184091 131 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.16□□□□□ -1.9
Rnf180Q3U827 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.16□□□□□ -1.9
Rnf180Q3U827 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.16□□□□□ -1.9
Rnf180Q3U827 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rnf180Q3U827 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Rnf180Q3U827 Mir499-201ENSMUST00000102357 79 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm26249-201ENSMUST00000116708 118 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm12550-201ENSMUST00000118478 329 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm26279-201ENSMUST00000157095 102 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm7582-201ENSMUST00000160831 603 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm27786-201ENSMUST00000184337 70 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm42774-201ENSMUST00000198854 283 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm24164-201ENSMUST00000093663 104 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Rnf180Q3U827 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.15□□□□□ -1.91
Rnf180Q3U827 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rnf180Q3U827 Gm12513-201ENSMUST00000118617 352 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm6444-201ENSMUST00000119611 458 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm12213-201ENSMUST00000119924 353 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm25488-201ENSMUST00000158728 118 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm6060-201ENSMUST00000188671 251 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm38311-201ENSMUST00000192945 165 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm45002-201ENSMUST00000208045 120 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Gm45543-201ENSMUST00000209327 88 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Rnf180Q3U827 Mir222-201ENSMUST00000083537 79 ntBASIC3.14□□□□□ -1.91
Rnf180Q3U827 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rnf180Q3U827 Mir542-201ENSMUST00000102186 85 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm22713-201ENSMUST00000116895 130 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm25015-201ENSMUST00000158400 128 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm25836-201ENSMUST00000158918 123 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm20144-201ENSMUST00000203031 165 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm26458-201ENSMUST00000082832 128 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Gm24163-201ENSMUST00000093660 132 ntBASIC3.13□□□□□ -1.91
Rnf180Q3U827 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf180Q3U827 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Snord19-201ENSMUST00000104609 76 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm13756-201ENSMUST00000117618 222 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm11204-201ENSMUST00000122438 147 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm26026-201ENSMUST00000122726 123 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm26265-202ENSMUST00000196326 133 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm43587-201ENSMUST00000199590 204 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm22299-201ENSMUST00000082663 136 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm24355-201ENSMUST00000082858 122 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm22723-201ENSMUST00000083820 129 ntBASIC3.12□□□□□ -1.91
Rnf180Q3U827 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Rnf180Q3U827 Gm22752-201ENSMUST00000102083 109 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Rnf180Q3U827 Gm12351-201ENSMUST00000118727 292 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Gm23466-201ENSMUST00000157133 106 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Gm25625-201ENSMUST00000157221 96 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Gm17052-201ENSMUST00000165496 289 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Mir471-201ENSMUST00000093596 67 ntBASIC3.11□□□□□ -1.91
Rnf180Q3U827 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Rnf180Q3U827 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Rnf180Q3U827 BC022960-201ENSMUST00000119987 1815 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm22097-201ENSMUST00000157929 278 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm24076-201ENSMUST00000158179 94 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm22517-201ENSMUST00000158265 136 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm23005-201ENSMUST00000158950 136 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm6788-201ENSMUST00000166459 270 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm25457-201ENSMUST00000179509 107 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Trbv18-201ENSMUST00000194256 294 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.1□□□□□ -1.91
Rnf180Q3U827 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Rnf180Q3U827 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms