Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.46□□□□□ -2.02
Col28a1Q2UY11 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.46□□□□□ -2.02
Col28a1Q2UY11 Gm22507-201ENSMUST00000082773 160 ntBASIC2.46□□□□□ -2.02
Col28a1Q2UY11 Gm24762-201ENSMUST00000083689 104 ntBASIC2.46□□□□□ -2.02
Col28a1Q2UY11 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.46□□□□□ -2.02
Col28a1Q2UY11 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col28a1Q2UY11 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm23013-201ENSMUST00000104146 106 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm26473-201ENSMUST00000116763 127 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Mir466k-201ENSMUST00000116774 122 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm25107-201ENSMUST00000122472 129 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm22225-201ENSMUST00000157358 278 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm22606-201ENSMUST00000158290 103 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm18991-201ENSMUST00000209225 746 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm45522-201ENSMUST00000210784 166 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Gm23462-201ENSMUST00000083264 104 ntBASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col28a1Q2UY11 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm26342-201ENSMUST00000104557 129 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm14402-201ENSMUST00000122217 508 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm25985-201ENSMUST00000122677 107 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm26291-201ENSMUST00000158889 137 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm28900-201ENSMUST00000185232 156 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm28825-201ENSMUST00000186233 238 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm43626-201ENSMUST00000198575 162 ntBASIC2.44□□□□□ -2.02
Col28a1Q2UY11 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col28a1Q2UY11 Gm25485-201ENSMUST00000104120 132 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm25529-201ENSMUST00000104850 92 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm24274-201ENSMUST00000116787 124 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm12443-201ENSMUST00000122308 323 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm24291-201ENSMUST00000157633 162 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm22666-201ENSMUST00000158717 164 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm45543-201ENSMUST00000209327 88 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col28a1Q2UY11 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm14215-201ENSMUST00000120578 221 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm24716-201ENSMUST00000157524 104 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm23536-201ENSMUST00000157541 134 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm25424-201ENSMUST00000157612 58 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm17067-202ENSMUST00000180131 123 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm43991-201ENSMUST00000203751 274 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm44470-201ENSMUST00000203913 142 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm25856-201ENSMUST00000082786 75 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm23239-201ENSMUST00000083006 181 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Mir208a-201ENSMUST00000083498 83 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col28a1Q2UY11 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Mir542-201ENSMUST00000102186 85 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm22658-201ENSMUST00000104196 155 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm25642-201ENSMUST00000175137 66 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm27271-201ENSMUST00000183509 170 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Mir7013-201ENSMUST00000183540 72 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm27753-201ENSMUST00000184742 203 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm29167-201ENSMUST00000190024 377 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm43722-201ENSMUST00000196054 124 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm44429-201ENSMUST00000203542 186 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm8031-201ENSMUST00000213430 626 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm10298-201ENSMUST00000074801 265 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm26494-201ENSMUST00000083154 143 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm24493-201ENSMUST00000083805 143 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Gm24163-201ENSMUST00000093660 132 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col28a1Q2UY11 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm24482-201ENSMUST00000117005 93 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm14020-201ENSMUST00000118165 662 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm14069-201ENSMUST00000120815 229 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm24075-201ENSMUST00000158175 72 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm26337-201ENSMUST00000178000 79 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm26097-201ENSMUST00000179642 93 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Mir6371-201ENSMUST00000184470 111 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm37693-201ENSMUST00000194562 234 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm45687-201ENSMUST00000209454 155 ntBASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Col28a1Q2UY11 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms