Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm6462-201ENSMUST00000081488 304 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm23298-201ENSMUST00000083181 107 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm24614-201ENSMUST00000083269 107 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm22057-201ENSMUST00000083387 107 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm25516-201ENSMUST00000083857 107 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm23947-201ENSMUST00000093636 107 ntBASIC3.78□□□□□ -1.8
Col17a1Q07563 Gm12086-201ENSMUST00000120863 228 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm24650-201ENSMUST00000157105 103 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm23982-201ENSMUST00000157141 106 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm22983-201ENSMUST00000158308 104 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm16404-201ENSMUST00000177739 468 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm14598-201ENSMUST00000180109 468 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm14625-201ENSMUST00000180231 468 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm19244-201ENSMUST00000204340 253 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.77□□□□□ -1.81
Col17a1Q07563 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.77□□□□□ -1.81
Col17a1Q07563 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
Col17a1Q07563 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Mir592-201ENSMUST00000102113 96 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Mir301b-201ENSMUST00000102333 97 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.76□□□□□ -1.81
Col17a1Q07563 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.76□□□□□ -1.81
Col17a1Q07563 Mir1967-201ENSMUST00000157789 82 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Mir1966-201ENSMUST00000158807 108 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm20526-201ENSMUST00000173416 158 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm28552-201ENSMUST00000190725 388 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm44391-201ENSMUST00000198490 93 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.76□□□□□ -1.81
Col17a1Q07563 Gm25022-201ENSMUST00000102205 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm24890-201ENSMUST00000104389 102 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm24481-201ENSMUST00000157210 102 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm37428-201ENSMUST00000193886 137 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.75□□□□□ -1.81
Col17a1Q07563 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col17a1Q07563 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col17a1Q07563 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col17a1Q07563 Gm15148-201ENSMUST00000117602 156 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Gm14008-201ENSMUST00000120483 274 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Gm14694-201ENSMUST00000121856 282 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Mir3106-201ENSMUST00000175401 82 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Mir669j-201ENSMUST00000179023 121 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Gm44010-201ENSMUST00000204432 331 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col17a1Q07563 Gm22062-201ENSMUST00000082563 107 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Mir10a-201ENSMUST00000083585 110 ntBASIC3.74□□□□□ -1.81
Col17a1Q07563 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col17a1Q07563 Mir687-201ENSMUST00000102166 89 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm22217-201ENSMUST00000157556 313 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm23312-201ENSMUST00000158774 102 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm16490-201ENSMUST00000165299 351 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm25121-201ENSMUST00000179846 79 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm27233-201ENSMUST00000184030 307 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm27952-201ENSMUST00000184748 105 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm23517-201ENSMUST00000082830 192 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm22576-201ENSMUST00000083733 104 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm14894-201ENSMUST00000117170 270 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm13210-201ENSMUST00000121483 273 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm15065-201ENSMUST00000121699 273 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm4916-201ENSMUST00000126139 642 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm23182-201ENSMUST00000158688 135 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm16111-201ENSMUST00000162128 285 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Mir3968-201ENSMUST00000175355 100 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm37449-201ENSMUST00000193016 270 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm18658-201ENSMUST00000195558 270 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.73□□□□□ -1.81
Col17a1Q07563 n-R5s96-201ENSMUST00000082574 124 ntBASIC3.73□□□□□ -1.81
Col17a1Q07563 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col17a1Q07563 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col17a1Q07563 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col17a1Q07563 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col17a1Q07563 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col17a1Q07563 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col17a1Q07563 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 Gm25621-201ENSMUST00000157223 114 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 Gm25054-201ENSMUST00000157370 97 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 183.8 ms