Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a1Q04857 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a1Q04857 Snord14c-201ENSMUST00000101927 86 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm22658-201ENSMUST00000104196 155 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm26249-201ENSMUST00000116708 118 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm6025-201ENSMUST00000121517 201 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm26049-201ENSMUST00000157313 108 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm43602-201ENSMUST00000196772 300 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm43993-201ENSMUST00000203972 247 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.45□□□□□ -1.86
Col6a1Q04857 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Gm24449-201ENSMUST00000083985 106 ntBASIC3.45□□□□□ -1.86
Col6a1Q04857 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col6a1Q04857 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Col6a1Q04857 Mir344c-201ENSMUST00000103919 92 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm23101-201ENSMUST00000157550 137 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm23476-201ENSMUST00000158881 274 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm22192-201ENSMUST00000175128 85 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm23963-201ENSMUST00000179603 77 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm37918-201ENSMUST00000192071 120 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Mir3969-201ENSMUST00000197106 92 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm25632-201ENSMUST00000083112 85 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.44□□□□□ -1.86
Col6a1Q04857 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Col6a1Q04857 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a1Q04857 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Col6a1Q04857 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a1Q04857 Snord90-201ENSMUST00000104568 111 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm11786-201ENSMUST00000120799 155 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm24846-201ENSMUST00000158033 108 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm22527-201ENSMUST00000158816 106 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm24388-201ENSMUST00000177872 107 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm43521-201ENSMUST00000197838 255 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm43107-201ENSMUST00000198729 255 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Col6a1Q04857 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.43□□□□□ -1.86
Col6a1Q04857 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a1Q04857 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm24122-201ENSMUST00000104107 132 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm11253-201ENSMUST00000118486 201 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm11414-201ENSMUST00000121795 263 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm23655-201ENSMUST00000122627 105 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm23230-201ENSMUST00000157298 133 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Mir5118-201ENSMUST00000175551 67 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm44564-201ENSMUST00000207985 180 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm23723-201ENSMUST00000082996 132 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.42□□□□□ -1.86
Col6a1Q04857 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Col6a1Q04857 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Col6a1Q04857 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm24010-201ENSMUST00000157731 282 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm24358-201ENSMUST00000158424 288 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm22532-201ENSMUST00000158822 140 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm4468-201ENSMUST00000170206 294 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm28409-201ENSMUST00000187064 103 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm28992-201ENSMUST00000190534 139 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Gm15235-201ENSMUST00000200572 194 ntBASIC3.41□□□□□ -1.86
Col6a1Q04857 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Col6a1Q04857 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col6a1Q04857 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.4□□□□□ -1.86
Col6a1Q04857 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col6a1Q04857 Gm22281-201ENSMUST00000157198 103 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a1Q04857 Mir7667-201ENSMUST00000183866 63 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 Gm44425-201ENSMUST00000203739 429 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 AC124104.1-201ENSMUST00000226279 417 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.4□□□□□ -1.87
Col6a1Q04857 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col6a1Q04857 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col6a1Q04857 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a1Q04857 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a1Q04857 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a1Q04857 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm12723-201ENSMUST00000120700 451 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm14491-201ENSMUST00000121919 199 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms