Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 Gm44419-201ENSMUST00000203338 229 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 Gm44533-201ENSMUST00000207782 268 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 Gm25078-201ENSMUST00000082530 107 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 Gm25930-201ENSMUST00000082785 107 ntBASIC1.7□□□□□ -2.14
Scn1bP97952 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn1bP97952 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Mir873a-201ENSMUST00000104863 77 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm23043-201ENSMUST00000157890 109 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm24737-201ENSMUST00000158861 100 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm23963-201ENSMUST00000179603 77 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm27421-201ENSMUST00000184729 167 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn1bP97952 Gm37693-201ENSMUST00000194562 234 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm5010-201ENSMUST00000213131 260 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm25130-201ENSMUST00000082650 156 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm23412-201ENSMUST00000083017 107 ntBASIC1.69□□□□□ -2.14
Scn1bP97952 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Scn1bP97952 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Scn1bP97952 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Scn1bP97952 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Scn1bP97952 Gm11572-201ENSMUST00000119164 120 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm14906-201ENSMUST00000119265 390 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm24630-201ENSMUST00000122768 106 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm22215-201ENSMUST00000157558 96 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm24358-201ENSMUST00000158424 288 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm24668-201ENSMUST00000158935 104 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.68□□□□□ -2.14
Scn1bP97952 Gm25450-201ENSMUST00000179144 107 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm25284-201ENSMUST00000180345 141 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm36946-201ENSMUST00000192706 435 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn1bP97952 Gm44473-201ENSMUST00000204039 152 ntBASIC1.68□□□□□ -2.14
Scn1bP97952 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.68□□□□□ -2.14
Scn1bP97952 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Scn1bP97952 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.67□□□□□ -2.14
Scn1bP97952 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm23551-201ENSMUST00000116852 121 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm23474-201ENSMUST00000158884 75 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm24572-201ENSMUST00000175505 88 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm22114-201ENSMUST00000177756 107 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm29037-201ENSMUST00000189092 313 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm37313-201ENSMUST00000191673 290 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Scn1bP97952 Gm44063-201ENSMUST00000203307 376 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm45754-201ENSMUST00000212380 279 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Gm22294-201ENSMUST00000083308 104 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Mir222-201ENSMUST00000083537 79 ntBASIC1.67□□□□□ -2.14
Scn1bP97952 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Scn1bP97952 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn1bP97952 Gm24098-201ENSMUST00000102075 109 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm25381-201ENSMUST00000102078 109 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm24275-201ENSMUST00000116780 146 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm12647-201ENSMUST00000118977 265 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm24262-201ENSMUST00000157431 144 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm22082-201ENSMUST00000157587 161 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm22603-201ENSMUST00000157603 96 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir3092-201ENSMUST00000174954 96 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm27540-201ENSMUST00000184950 187 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm43505-201ENSMUST00000200579 139 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Gm45013-201ENSMUST00000206883 178 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.66□□□□□ -2.14
Scn1bP97952 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn1bP97952 Mir344e-201ENSMUST00000104677 66 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Mir293-201ENSMUST00000104841 80 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Gm15536-201ENSMUST00000121411 114 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Gm23208-201ENSMUST00000158666 127 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Gm26968-201ENSMUST00000182894 481 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Gm27517-201ENSMUST00000184347 236 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.65□□□□□ -2.15
Scn1bP97952 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Scn1bP97952 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Scn1bP97952 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Gm26345-201ENSMUST00000157534 120 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn1bP97952 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Gm29661-201ENSMUST00000186781 315 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Gm29308-201ENSMUST00000188863 315 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Gm29107-201ENSMUST00000190910 347 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 Gm45543-201ENSMUST00000209327 88 ntBASIC1.64□□□□□ -2.15
Scn1bP97952 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms