Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir6419-201ENSMUST00000184784 113 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm29397-201ENSMUST00000185205 333 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm26164-201ENSMUST00000083793 104 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
Nkx3-1P97436 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.91□□□□□ -2.26
Nkx3-1P97436 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.9□□□□□ -2.26
Nkx3-1P97436 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
Nkx3-1P97436 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm24342-201ENSMUST00000103907 104 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm23015-201ENSMUST00000104145 128 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm24338-201ENSMUST00000104205 127 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Snord98-201ENSMUST00000116819 65 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm11606-201ENSMUST00000120706 617 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm24632-201ENSMUST00000122770 323 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm25914-201ENSMUST00000157618 153 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm23557-201ENSMUST00000157820 138 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm26089-201ENSMUST00000157898 107 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Traj60-201ENSMUST00000167781 54 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21754-201ENSMUST00000177550 479 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Mir7091-201ENSMUST00000184075 79 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm27517-201ENSMUST00000184347 236 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Mir6388-201ENSMUST00000184417 75 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm18291-201ENSMUST00000190791 301 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Mir3961-201ENSMUST00000198795 59 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm45907-201ENSMUST00000213023 193 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm21937-201ENSMUST00000222825 218 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm11351-202ENSMUST00000225724 478 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Mir221-201ENSMUST00000083488 95 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Mir344-201ENSMUST00000083634 95 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.9□□□□□ -2.27
Nkx3-1P97436 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Nkx3-1P97436 Gm14803-201ENSMUST00000117163 361 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm22199-201ENSMUST00000122660 126 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm27926-201ENSMUST00000157180 66 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm23854-201ENSMUST00000158378 108 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm22075-201ENSMUST00000158599 192 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm23022-201ENSMUST00000158768 180 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm24085-201ENSMUST00000175172 116 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm24308-201ENSMUST00000177773 114 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Mir6380-201ENSMUST00000184334 81 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm27419-201ENSMUST00000184576 109 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm26265-202ENSMUST00000196326 133 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm44458-201ENSMUST00000196594 143 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm44429-201ENSMUST00000203542 186 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Gm24037-201ENSMUST00000082871 180 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Mir27b-201ENSMUST00000083541 73 ntBASIC0.89□□□□□ -2.27
Nkx3-1P97436 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm14269-201ENSMUST00000120455 306 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm11522-201ENSMUST00000120533 176 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm23435-201ENSMUST00000157183 156 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm22791-201ENSMUST00000157232 145 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm23893-201ENSMUST00000158106 134 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm25434-201ENSMUST00000158278 167 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Nkx3-1P97436 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm37337-201ENSMUST00000192601 993 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm43199-201ENSMUST00000200019 307 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm45268-201ENSMUST00000210046 370 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm23627-201ENSMUST00000082459 107 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm22502-201ENSMUST00000082488 107 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm22977-201ENSMUST00000082615 107 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Gm24149-201ENSMUST00000082757 107 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Mir22-201ENSMUST00000083595 95 ntBASIC0.88□□□□□ -2.27
Nkx3-1P97436 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Nkx3-1P97436 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm23169-201ENSMUST00000157157 112 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm23208-201ENSMUST00000158666 127 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Mir1936-201ENSMUST00000158699 93 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm17052-201ENSMUST00000165496 289 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms