Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm26435-201ENSMUST00000179026 107 ntBASIC1.5□□□□□ -2.17
Sox3P53784 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm27248-201ENSMUST00000184004 166 ntBASIC1.5□□□□□ -2.17
Sox3P53784 Gm29397-201ENSMUST00000185205 333 ntBASIC1.5□□□□□ -2.17
Sox3P53784 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Sox3P53784 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 Gm28211-201ENSMUST00000190920 315 ntBASIC1.5□□□□□ -2.17
Sox3P53784 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Sox3P53784 Gm44149-201ENSMUST00000204256 226 ntBASIC1.5□□□□□ -2.17
Sox3P53784 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.5□□□□□ -2.17
Sox3P53784 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.5□□□□□ -2.17
Sox3P53784 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.5□□□□□ -2.17
Sox3P53784 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Sox3P53784 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Snord71-201ENSMUST00000104361 85 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm14803-201ENSMUST00000117163 361 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm23435-201ENSMUST00000157183 156 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm22075-201ENSMUST00000158599 192 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm24308-201ENSMUST00000177773 114 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm24487-201ENSMUST00000178017 63 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm9156-201ENSMUST00000189660 463 ntBASIC1.49□□□□□ -2.17
Sox3P53784 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Sox3P53784 Gm24043-201ENSMUST00000083108 116 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Gm22972-201ENSMUST00000083297 131 ntBASIC1.49□□□□□ -2.17
Sox3P53784 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Sox3P53784 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Sox3P53784 Gm15526-201ENSMUST00000112504 204 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm23336-201ENSMUST00000117023 123 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm14923-201ENSMUST00000118270 155 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm26181-201ENSMUST00000157687 106 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm24851-201ENSMUST00000158028 103 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm27845-201ENSMUST00000184479 114 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm28257-201ENSMUST00000185244 463 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm28912-201ENSMUST00000189001 234 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.48□□□□□ -2.17
Sox3P53784 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm43472-201ENSMUST00000200175 154 ntBASIC1.48□□□□□ -2.17
Sox3P53784 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Sox3P53784 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.48□□□□□ -2.17
Sox3P53784 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.48□□□□□ -2.17
Sox3P53784 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.48□□□□□ -2.17
Sox3P53784 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.48□□□□□ -2.17
Sox3P53784 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.48□□□□□ -2.17
Sox3P53784 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Sox3P53784 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Sox3P53784 Mir374b-201ENSMUST00000102314 95 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm23015-201ENSMUST00000104145 128 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Mir1b-201ENSMUST00000117012 122 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm11254-201ENSMUST00000122368 653 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Sox3P53784 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.47□□□□□ -2.17
Sox3P53784 Gm25827-201ENSMUST00000157089 107 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Rnu7-201ENSMUST00000158458 62 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm25958-201ENSMUST00000175114 71 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm24390-201ENSMUST00000179578 62 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm7654-201ENSMUST00000186738 683 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm38050-201ENSMUST00000191904 238 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm19901-201ENSMUST00000192191 495 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Gm43035-201ENSMUST00000197626 517 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.47□□□□□ -2.17
Sox3P53784 Gm44811-201ENSMUST00000209120 228 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sox3P53784 Gm22365-201ENSMUST00000093750 117 ntBASIC1.47□□□□□ -2.17
Sox3P53784 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Sox3P53784 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.46□□□□□ -2.18
Sox3P53784 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm11798-201ENSMUST00000119150 421 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm11862-201ENSMUST00000119678 659 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm14972-201ENSMUST00000121780 364 ntBASIC1.46□□□□□ -2.18
Sox3P53784 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm24288-201ENSMUST00000157630 144 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm24192-201ENSMUST00000157978 145 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm22510-201ENSMUST00000179304 79 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm26336-201ENSMUST00000179449 79 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm26390-201ENSMUST00000179628 79 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm5023-201ENSMUST00000217442 587 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm30155-201ENSMUST00000223458 339 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm24406-201ENSMUST00000083026 128 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.46□□□□□ -2.18
Sox3P53784 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm22791-201ENSMUST00000157232 145 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm23328-201ENSMUST00000157418 132 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm23535-201ENSMUST00000157542 106 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm24174-201ENSMUST00000158933 111 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm22565-201ENSMUST00000175540 69 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm10105-201ENSMUST00000184601 270 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms