Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Sox1P53783 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sox1P53783 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Sox1P53783 Gm16171-201ENSMUST00000118004 324 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Gm24061-201ENSMUST00000157489 120 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Gm22187-201ENSMUST00000157819 129 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Gm23152-201ENSMUST00000175322 116 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Mir3076-201ENSMUST00000175415 60 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.34□□□□□ -1.87
Sox1P53783 Gm10025-201ENSMUST00000079568 372 ntBASIC3.34□□□□□ -1.87
Sox1P53783 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.34□□□□□ -1.87
Sox1P53783 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Sox1P53783 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.34□□□□□ -1.88
Sox1P53783 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Sox1P53783 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Sox1P53783 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Sox1P53783 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Sox1P53783 Mir291a-201ENSMUST00000104815 82 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Gm15214-201ENSMUST00000122155 470 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Gm24480-201ENSMUST00000157442 103 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Gm38311-201ENSMUST00000192945 165 ntBASIC3.33□□□□□ -1.88
Sox1P53783 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Gm6030-201ENSMUST00000078768 402 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Gm26265-201ENSMUST00000083277 135 ntBASIC3.33□□□□□ -1.88
Sox1P53783 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Sox1P53783 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Sox1P53783 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sox1P53783 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Sox1P53783 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sox1P53783 Gm24234-201ENSMUST00000104316 107 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm25529-201ENSMUST00000104850 92 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm29613-201ENSMUST00000185846 313 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm29544-201ENSMUST00000188860 313 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm28808-201ENSMUST00000190978 313 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm38298-201ENSMUST00000193578 118 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm37037-201ENSMUST00000194475 424 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm43602-201ENSMUST00000196772 300 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Mir1291-201ENSMUST00000199842 117 ntBASIC3.32□□□□□ -1.88
Sox1P53783 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm22245-201ENSMUST00000082479 103 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm24461-201ENSMUST00000082735 103 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Snora34-201ENSMUST00000083402 138 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Sox1P53783 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Sox1P53783 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sox1P53783 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Sox1P53783 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.32□□□□□ -1.88
Sox1P53783 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Sox1P53783 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Sox1P53783 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Sox1P53783 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Sox1P53783 Gm23772-201ENSMUST00000104433 102 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Gm14536-201ENSMUST00000118324 138 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Gm15027-201ENSMUST00000120922 138 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Gm26360-201ENSMUST00000158872 103 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Mir28b-201ENSMUST00000175399 80 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Mir6402-201ENSMUST00000183406 80 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.31□□□□□ -1.88
Sox1P53783 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Sox1P53783 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox1P53783 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox1P53783 Gm26341-201ENSMUST00000104561 134 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm16533-201ENSMUST00000140035 228 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm23957-201ENSMUST00000157209 90 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm22141-201ENSMUST00000157403 277 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm23080-201ENSMUST00000157846 103 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm16584-201ENSMUST00000159267 189 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm26297-201ENSMUST00000179464 132 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm27580-201ENSMUST00000183666 149 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Gm37116-201ENSMUST00000195161 147 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.3□□□□□ -1.88
Sox1P53783 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.3□□□□□ -1.88
Sox1P53783 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sox1P53783 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sox1P53783 Gm24232-201ENSMUST00000104314 132 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Gm13314-201ENSMUST00000118742 335 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Gm13913-201ENSMUST00000121126 260 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Gm24916-201ENSMUST00000157287 79 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Gm44459-201ENSMUST00000203926 160 ntBASIC3.29□□□□□ -1.88
Sox1P53783 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Gm23247-201ENSMUST00000083373 107 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.29□□□□□ -1.88
Sox1P53783 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Sox1P53783 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sox1P53783 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sox1P53783 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sox1P53783 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sox1P53783 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sox1P53783 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sox1P53783 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sox1P53783 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Sox1P53783 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Sox1P53783 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms