| Clcn3 | P51791 | Gm25450-201 | ENSMUST00000179144 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Mir7026-201 | ENSMUST00000184384 | 67 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Scgb1b13-ps-201 | ENSMUST00000187330 | 273 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Vmn1r-ps16-201 | ENSMUST00000204747 | 105 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm45445-201 | ENSMUST00000209586 | 232 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Olfr152-201 | ENSMUST00000090709 | 951 nt | APPRIS P2 BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm42635-201 | ENSMUST00000200266 | 2571 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm37331-201 | ENSMUST00000192367 | 3375 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm42664-201 | ENSMUST00000199417 | 3239 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm24098-201 | ENSMUST00000102075 | 109 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25381-201 | ENSMUST00000102078 | 109 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm23951-201 | ENSMUST00000104029 | 132 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm16510-201 | ENSMUST00000153501 | 249 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm13976-201 | ENSMUST00000154367 | 479 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25059-201 | ENSMUST00000157367 | 117 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25933-201 | ENSMUST00000178943 | 108 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm38060-201 | ENSMUST00000194822 | 464 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm43676-201 | ENSMUST00000197532 | 540 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Mir7215-201 | ENSMUST00000200383 | 51 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm44555-201 | ENSMUST00000209008 | 148 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Vmn2r-ps50-201 | ENSMUST00000209317 | 120 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | AC154552.7-201 | ENSMUST00000222824 | 156 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Vmn1r78-202 | ENSMUST00000228244 | 7931 nt | APPRIS P1 BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Ppp1r3a-201 | ENSMUST00000045096 | 6965 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm4746-201 | ENSMUST00000120395 | 2406 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25565-201 | ENSMUST00000104605 | 105 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm26249-201 | ENSMUST00000116708 | 118 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25316-201 | ENSMUST00000116826 | 118 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm15002-201 | ENSMUST00000118406 | 452 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm12926-201 | ENSMUST00000121158 | 409 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm23048-201 | ENSMUST00000157237 | 129 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm28169-201 | ENSMUST00000190342 | 345 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | AC165157.3-201 | ENSMUST00000220815 | 103 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm14327-202 | ENSMUST00000108935 | 1451 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm44114-201 | ENSMUST00000203270 | 2727 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Trdn-201 | ENSMUST00000095762 | 4514 nt | APPRIS P2 TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm22984-201 | ENSMUST00000122751 | 122 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Nell1os-202 | ENSMUST00000136672 | 491 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm26345-201 | ENSMUST00000157534 | 120 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm24053-201 | ENSMUST00000158620 | 105 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm24573-201 | ENSMUST00000175499 | 112 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm27991-201 | ENSMUST00000184804 | 137 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm37715-201 | ENSMUST00000193206 | 235 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm37763-201 | ENSMUST00000193445 | 120 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Mir7232-201 | ENSMUST00000197929 | 74 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | AC141895.1-201 | ENSMUST00000218141 | 273 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | mt-Ti-201 | ENSMUST00000082393 | 69 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm26126-201 | ENSMUST00000083188 | 164 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Snord104-201 | ENSMUST00000083192 | 70 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | F8-202 | ENSMUST00000114085 | 7295 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Lipi-201 | ENSMUST00000062721 | 2082 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Zfy2-201 | ENSMUST00000115891 | 2816 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm12351-201 | ENSMUST00000118727 | 292 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm11192-201 | ENSMUST00000127017 | 151 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm22083-201 | ENSMUST00000157586 | 102 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Snora15-201 | ENSMUST00000177461 | 131 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm22621-201 | ENSMUST00000179678 | 74 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm24415-201 | ENSMUST00000180218 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm27694-201 | ENSMUST00000184740 | 86 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm29167-201 | ENSMUST00000190024 | 377 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm19901-201 | ENSMUST00000192191 | 495 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm43512-201 | ENSMUST00000198495 | 176 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | AC125374.2-201 | ENSMUST00000214278 | 162 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm25124-201 | ENSMUST00000083345 | 164 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Mir423-201 | ENSMUST00000083584 | 109 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Olfr24-203 | ENSMUST00000216754 | 4327 nt | APPRIS P1 TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Olfr794-202 | ENSMUST00000204820 | 3044 nt | APPRIS P1 TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm45178-201 | ENSMUST00000207744 | 4110 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm38255-201 | ENSMUST00000194910 | 2996 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | Gm15303-201 | ENSMUST00000118676 | 2624 nt | BASIC | 2.21 | □□□□□ -2.05 | | |
| Clcn3 | P51791 | n-R5s67-201 | ENSMUST00000104336 | 114 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm14773-201 | ENSMUST00000125932 | 451 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm25460-201 | ENSMUST00000157954 | 127 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm27579-201 | ENSMUST00000158113 | 63 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm24177-201 | ENSMUST00000158927 | 131 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Mir8090-201 | ENSMUST00000185078 | 136 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm45859-201 | ENSMUST00000212794 | 214 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm46997-201 | ENSMUST00000222108 | 217 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | AC166830.2-201 | ENSMUST00000225821 | 196 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm22299-201 | ENSMUST00000082663 | 136 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm10509-201 | ENSMUST00000097384 | 259 nt | APPRIS P1 BASIC | 2.21 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Tlr8-202 | ENSMUST00000112170 | 3431 nt | APPRIS P1 TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Traj56-201 | ENSMUST00000103689 | 63 nt | APPRIS P1 BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm11786-201 | ENSMUST00000120799 | 155 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm26479-201 | ENSMUST00000122620 | 106 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm24896-201 | ENSMUST00000122741 | 135 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm25805-201 | ENSMUST00000122788 | 108 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm23033-201 | ENSMUST00000157996 | 134 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm23342-201 | ENSMUST00000158958 | 115 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm16306-201 | ENSMUST00000160568 | 176 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm27271-201 | ENSMUST00000183509 | 170 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Mir7017-201 | ENSMUST00000184894 | 62 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Mir6901-201 | ENSMUST00000185062 | 62 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Mir6376-201 | ENSMUST00000185149 | 131 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm29406-201 | ENSMUST00000186400 | 235 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm29005-201 | ENSMUST00000186773 | 320 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm28921-201 | ENSMUST00000190219 | 378 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm26265-202 | ENSMUST00000196326 | 133 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | Gm44666-201 | ENSMUST00000208544 | 391 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Clcn3 | P51791 | AC159709.1-201 | ENSMUST00000220445 | 349 nt | BASIC | 2.2 | □□□□□ -2.06 | | |