Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Shmt1P50431 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Shmt1P50431 Gm8260-201ENSMUST00000119230 353 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm11414-201ENSMUST00000121795 263 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm24440-201ENSMUST00000157236 63 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm26482-201ENSMUST00000158015 62 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm24512-201ENSMUST00000174963 65 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm26097-201ENSMUST00000179642 93 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm27793-201ENSMUST00000183405 76 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm27786-201ENSMUST00000184337 70 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm28344-201ENSMUST00000185704 279 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm29597-201ENSMUST00000188035 308 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm44182-201ENSMUST00000204052 115 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm24453-201ENSMUST00000083346 76 ntBASIC2.84□□□□□ -1.95
Shmt1P50431 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Shmt1P50431 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Shmt1P50431 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Shmt1P50431 Gm24291-201ENSMUST00000157633 162 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Gm22651-201ENSMUST00000157872 94 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Gm24922-201ENSMUST00000158511 102 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Gm22500-201ENSMUST00000158982 99 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Snord53-201ENSMUST00000175146 78 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Gm23933-201ENSMUST00000178405 79 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.83□□□□□ -1.96
Shmt1P50431 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Gm10813-201ENSMUST00000099936 90 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Shmt1P50431 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.83□□□□□ -1.96
Shmt1P50431 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Shmt1P50431 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Shmt1P50431 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Shmt1P50431 Gm15497-201ENSMUST00000119137 551 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Shmt1P50431 Gm25625-201ENSMUST00000157221 96 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm22384-201ENSMUST00000158187 104 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm23409-201ENSMUST00000158516 237 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm25470-201ENSMUST00000175576 111 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm20718-201ENSMUST00000176058 259 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm6003-201ENSMUST00000187903 463 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm44470-201ENSMUST00000203913 142 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm45116-201ENSMUST00000207392 275 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Gm23264-201ENSMUST00000083372 107 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Shmt1P50431 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.82□□□□□ -1.96
Shmt1P50431 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Shmt1P50431 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Shmt1P50431 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Shmt1P50431 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Shmt1P50431 Gm22782-201ENSMUST00000104082 132 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm12449-201ENSMUST00000117572 234 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm23535-201ENSMUST00000157542 106 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm22527-201ENSMUST00000158816 106 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm24736-201ENSMUST00000158862 130 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm26291-201ENSMUST00000158889 137 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm24082-201ENSMUST00000175175 83 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm24816-201ENSMUST00000175311 151 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Gm22421-201ENSMUST00000083058 107 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Shmt1P50431 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.81□□□□□ -1.96
Shmt1P50431 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Shmt1P50431 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shmt1P50431 Gm22075-201ENSMUST00000158599 192 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm22476-201ENSMUST00000158902 100 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm22699-201ENSMUST00000175376 105 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm25457-201ENSMUST00000179509 107 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm23963-201ENSMUST00000179603 77 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm27698-201ENSMUST00000184060 249 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm28992-201ENSMUST00000190534 139 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm37693-201ENSMUST00000194562 234 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Gm42834-201ENSMUST00000196845 256 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Shmt1P50431 Gm22248-201ENSMUST00000082482 150 ntBASIC2.8□□□□□ -1.96
Shmt1P50431 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Shmt1P50431 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Shmt1P50431 Gm12926-201ENSMUST00000121158 409 ntBASIC2.79□□□□□ -1.96
Shmt1P50431 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.79□□□□□ -1.96
Shmt1P50431 Gm43199-201ENSMUST00000200019 307 ntBASIC2.79□□□□□ -1.96
Shmt1P50431 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.79□□□□□ -1.96
Shmt1P50431 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.79□□□□□ -1.96
Shmt1P50431 Gm4945-201ENSMUST00000075152 453 ntBASIC2.79□□□□□ -1.96
Shmt1P50431 Gm23239-201ENSMUST00000083006 181 ntBASIC2.79□□□□□ -1.96
Shmt1P50431 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Shmt1P50431 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Shmt1P50431 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Shmt1P50431 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms