Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm24056-201ENSMUST00000158617 146 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm17113-201ENSMUST00000170118 171 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm22565-201ENSMUST00000175540 69 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm6660-201ENSMUST00000179149 468 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm37338-201ENSMUST00000191986 127 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm42594-201ENSMUST00000199511 246 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm44655-201ENSMUST00000207768 423 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm44959-201ENSMUST00000209127 231 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 mt-Td-201ENSMUST00000082404 70 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm23453-201ENSMUST00000083326 106 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.56□□□□□ -2.16
Col2a1P28481 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col2a1P28481 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col2a1P28481 Mir701-201ENSMUST00000102208 109 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm24126-201ENSMUST00000104111 106 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm15211-201ENSMUST00000118932 528 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm14709-201ENSMUST00000121225 304 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.55□□□□□ -2.16
Col2a1P28481 Gm24847-201ENSMUST00000158032 108 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm25450-201ENSMUST00000179144 107 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm27332-201ENSMUST00000184893 112 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm29147-201ENSMUST00000186846 315 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm29227-201ENSMUST00000187139 315 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm29034-201ENSMUST00000188099 315 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm28160-201ENSMUST00000191229 315 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm37129-201ENSMUST00000195791 315 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm44337-201ENSMUST00000196553 114 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm43286-201ENSMUST00000197420 424 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.55□□□□□ -2.16
Col2a1P28481 Gm40810-201ENSMUST00000219149 253 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Olfr197-201ENSMUST00000080031 926 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Gm23723-201ENSMUST00000082996 132 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Mir10b-201ENSMUST00000083566 68 ntBASIC1.55□□□□□ -2.16
Col2a1P28481 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col2a1P28481 Gm25111-201ENSMUST00000116686 147 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm11935-201ENSMUST00000118608 399 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm12647-201ENSMUST00000118977 265 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm11904-201ENSMUST00000120562 248 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm23588-201ENSMUST00000157659 99 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm23262-201ENSMUST00000158323 168 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm22113-201ENSMUST00000158343 104 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm23474-201ENSMUST00000158884 75 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Mir6355-201ENSMUST00000183687 106 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.54□□□□□ -2.16
Col2a1P28481 Gm29005-201ENSMUST00000186773 320 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.54□□□□□ -2.16
Col2a1P28481 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.54□□□□□ -2.16
Col2a1P28481 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm23055-201ENSMUST00000082805 94 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm23727-201ENSMUST00000083352 164 ntBASIC1.54□□□□□ -2.16
Col2a1P28481 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col2a1P28481 Gm22780-201ENSMUST00000104084 132 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm25416-201ENSMUST00000104221 107 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm26256-201ENSMUST00000122499 186 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm22929-201ENSMUST00000175517 107 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm22263-201ENSMUST00000180060 104 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28838-201ENSMUST00000186338 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm29635-201ENSMUST00000187221 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm29026-201ENSMUST00000187787 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28797-201ENSMUST00000188543 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28855-201ENSMUST00000188680 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28705-201ENSMUST00000189548 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28939-201ENSMUST00000190351 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm28223-201ENSMUST00000190469 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm29092-201ENSMUST00000190768 315 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Col2a1P28481 Gm44459-201ENSMUST00000203926 160 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.53□□□□□ -2.16
Col2a1P28481 Gm45288-201ENSMUST00000210236 151 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.53□□□□□ -2.16
Col2a1P28481 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.53□□□□□ -2.16
Col2a1P28481 Gm23423-201ENSMUST00000082782 106 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Mir32-201ENSMUST00000083610 70 ntBASIC1.53□□□□□ -2.16
Col2a1P28481 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Col2a1P28481 Gm25787-201ENSMUST00000104709 92 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col2a1P28481 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.52□□□□□ -2.17
Col2a1P28481 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.52□□□□□ -2.17
Col2a1P28481 Gm23328-201ENSMUST00000157418 132 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm25454-201ENSMUST00000157947 315 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm24501-201ENSMUST00000158452 62 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm26092-201ENSMUST00000179798 97 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm20058-201ENSMUST00000186939 284 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm37557-201ENSMUST00000191640 139 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm38019-201ENSMUST00000195133 380 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm42570-201ENSMUST00000195937 292 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm44409-201ENSMUST00000198810 166 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm43914-201ENSMUST00000203592 594 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm44055-201ENSMUST00000204376 247 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms