Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Mir6408-201ENSMUST00000183643 91 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Mir7050-201ENSMUST00000184636 60 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Mir6914-201ENSMUST00000184999 69 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd9P28357 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.36□□□□□ -1.87
Hoxd9P28357 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm10025-201ENSMUST00000079568 372 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm24099-201ENSMUST00000083384 107 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.36□□□□□ -1.87
Hoxd9P28357 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm23256-201ENSMUST00000102235 110 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm23654-201ENSMUST00000116758 126 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm23123-201ENSMUST00000157648 144 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm23666-201ENSMUST00000158053 116 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm24727-201ENSMUST00000158231 144 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm25860-201ENSMUST00000158252 126 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm25491-201ENSMUST00000158733 308 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm22908-201ENSMUST00000177620 110 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm6060-201ENSMUST00000188671 251 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm22354-201ENSMUST00000083919 70 ntBASIC3.35□□□□□ -1.87
Hoxd9P28357 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd9P28357 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hoxd9P28357 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd9P28357 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.34□□□□□ -1.87
Hoxd9P28357 Mir1934-201ENSMUST00000158127 83 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm23476-201ENSMUST00000158881 274 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm26141-201ENSMUST00000175299 126 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm28155-201ENSMUST00000191066 151 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm37104-201ENSMUST00000193278 196 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm44964-201ENSMUST00000207011 273 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.34□□□□□ -1.87
Hoxd9P28357 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hoxd9P28357 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd9P28357 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd9P28357 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hoxd9P28357 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Hoxd9P28357 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hoxd9P28357 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm24096-201ENSMUST00000103905 110 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm26076-201ENSMUST00000104065 105 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm25764-201ENSMUST00000104092 134 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm11598-201ENSMUST00000119257 357 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm13588-201ENSMUST00000120026 135 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm24846-201ENSMUST00000158033 108 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm24277-201ENSMUST00000158661 104 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Mir5127-201ENSMUST00000175295 71 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm8034-201ENSMUST00000178853 132 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hoxd9P28357 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm23925-201ENSMUST00000082471 132 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm22154-201ENSMUST00000083844 131 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.33□□□□□ -1.88
Hoxd9P28357 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hoxd9P28357 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hoxd9P28357 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hoxd9P28357 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hoxd9P28357 Mir547-201ENSMUST00000102051 78 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm24376-201ENSMUST00000104399 127 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm22497-201ENSMUST00000104499 131 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm25107-201ENSMUST00000122472 129 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm22560-201ENSMUST00000157332 120 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm16289-201ENSMUST00000162079 183 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm37575-201ENSMUST00000195467 309 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Gm2189-201ENSMUST00000201419 429 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hoxd9P28357 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hoxd9P28357 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hoxd9P28357 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hoxd9P28357 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hoxd9P28357 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hoxd9P28357 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.32□□□□□ -1.88
Hoxd9P28357 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd9P28357 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.31□□□□□ -1.88
Hoxd9P28357 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.31□□□□□ -1.88
Hoxd9P28357 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd9P28357 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd9P28357 Gm22590-201ENSMUST00000104247 128 ntBASIC3.31□□□□□ -1.88
Hoxd9P28357 Gm14687-201ENSMUST00000120206 363 ntBASIC3.31□□□□□ -1.88
Hoxd9P28357 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms