Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir320-201ENSMUST00000083594 82 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.04□□□□□ -2.24
Sdc1P18828 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.24
Sdc1P18828 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Sdc1P18828 Gm26500-201ENSMUST00000101867 106 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Gm12770-201ENSMUST00000121734 462 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Mir1904-201ENSMUST00000122702 80 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Gm25836-201ENSMUST00000158918 123 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Gm17067-202ENSMUST00000180131 123 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Mir6406-201ENSMUST00000183592 120 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Gm38041-201ENSMUST00000194445 661 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Gm25579-201ENSMUST00000083407 106 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.03□□□□□ -2.24
Sdc1P18828 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
Sdc1P18828 Gm26339-201ENSMUST00000102368 99 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm25485-201ENSMUST00000104120 132 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm23836-201ENSMUST00000104434 129 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm22199-201ENSMUST00000122660 126 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm24393-201ENSMUST00000158135 97 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm22113-201ENSMUST00000158343 104 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.02□□□□□ -2.25
Sdc1P18828 Gm45654-201ENSMUST00000210980 123 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Sdc1P18828 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm24152-201ENSMUST00000082764 163 ntBASIC1.02□□□□□ -2.25
Sdc1P18828 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm22761-201ENSMUST00000102278 96 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Sdc1P18828 Gm14923-201ENSMUST00000118270 155 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm12143-201ENSMUST00000119666 332 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm13967-201ENSMUST00000120404 380 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm22985-201ENSMUST00000122754 116 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm22435-201ENSMUST00000158552 128 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm25820-202ENSMUST00000197479 128 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm20144-201ENSMUST00000203031 165 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm45150-201ENSMUST00000206051 467 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm45119-201ENSMUST00000207612 199 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm33654-201ENSMUST00000221704 215 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.01□□□□□ -2.25
Sdc1P18828 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm22980-201ENSMUST00000082608 70 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Gm25409-201ENSMUST00000083764 131 ntBASIC1.01□□□□□ -2.25
Sdc1P18828 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Sdc1P18828 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Sdc1P18828 Gm23950-201ENSMUST00000104026 129 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm22785-201ENSMUST00000104087 132 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm14296-202ENSMUST00000108931 750 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm13588-201ENSMUST00000120026 135 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm11891-201ENSMUST00000121241 619 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm26213-201ENSMUST00000158582 110 ntBASIC1□□□□□ -2.25
Sdc1P18828 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1□□□□□ -2.25
Sdc1P18828 Cfap61-214ENSMUST00000167179 183 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm23419-201ENSMUST00000175523 84 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm26652-202ENSMUST00000181672 475 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm9251-201ENSMUST00000197202 628 ntBASIC1□□□□□ -2.25
Sdc1P18828 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm45704-201ENSMUST00000212582 403 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm24356-201ENSMUST00000082859 106 ntBASIC1□□□□□ -2.25
Sdc1P18828 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Sdc1P18828 Gm12080-201ENSMUST00000119821 1883 ntBASIC1□□□□□ -2.25
Sdc1P18828 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.99□□□□□ -2.25
Sdc1P18828 Gm22664-201ENSMUST00000158719 105 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm2962-201ENSMUST00000159266 336 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Mir3061-201ENSMUST00000175129 91 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm22929-201ENSMUST00000175517 107 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm26180-201ENSMUST00000179942 107 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Mir7017-201ENSMUST00000184894 62 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm43199-201ENSMUST00000200019 307 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.99□□□□□ -2.25
Sdc1P18828 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Sdc1P18828 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.99□□□□□ -2.25
Sdc1P18828 Gm24037-201ENSMUST00000082871 180 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm26164-201ENSMUST00000083793 104 ntBASIC0.99□□□□□ -2.25
Sdc1P18828 Gm24588-201ENSMUST00000116696 83 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Gm24177-201ENSMUST00000158927 131 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Gm20462-201ENSMUST00000172623 408 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Gm37579-201ENSMUST00000194291 142 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Gm25789-201ENSMUST00000083294 76 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Mir211-201ENSMUST00000083651 106 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 BC022960-201ENSMUST00000119987 1815 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.98□□□□□ -2.25
Sdc1P18828 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Sdc1P18828 Gm14922-201ENSMUST00000121131 163 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.97□□□□□ -2.25
Sdc1P18828 Gm23048-201ENSMUST00000157237 129 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm24487-201ENSMUST00000178017 63 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Mir7091-201ENSMUST00000184075 79 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm20257-202ENSMUST00000188643 130 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm28992-201ENSMUST00000190534 139 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm44960-201ENSMUST00000207403 141 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.97□□□□□ -2.25
Sdc1P18828 Gm24355-201ENSMUST00000082858 122 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms