Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm26011-201ENSMUST00000104410 104 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm22193-201ENSMUST00000116868 76 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm23032-201ENSMUST00000157995 107 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm24549-201ENSMUST00000158647 139 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm24678-201ENSMUST00000158756 104 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Col1a1P11087 Gm20409-201ENSMUST00000173457 130 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm29661-201ENSMUST00000186781 315 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Col1a1P11087 Gm29308-201ENSMUST00000188863 315 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm29022-201ENSMUST00000190702 225 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm38231-201ENSMUST00000192030 347 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm18213-201ENSMUST00000207850 178 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.21□□□□□ -2.38
Col1a1P11087 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.2□□□□□ -2.38
Col1a1P11087 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm16186-201ENSMUST00000120132 216 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm23761-201ENSMUST00000158347 104 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm17528-201ENSMUST00000171026 239 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm25874-201ENSMUST00000178030 79 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm28299-201ENSMUST00000189908 339 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 Gm38395-201ENSMUST00000199904 830 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.2□□□□□ -2.38
Col1a1P11087 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Col1a1P11087 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm24468-201ENSMUST00000104489 104 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm16053-201ENSMUST00000120511 188 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm11849-201ENSMUST00000121293 261 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm14713-201ENSMUST00000122362 686 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm22076-201ENSMUST00000158601 84 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm22668-201ENSMUST00000158716 260 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Mir15a-201ENSMUST00000175266 84 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm24464-201ENSMUST00000179697 107 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm22263-201ENSMUST00000180060 104 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm27942-201ENSMUST00000184669 101 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm27735-201ENSMUST00000185085 76 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Col1a1P11087 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.19□□□□□ -2.38
Col1a1P11087 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.19□□□□□ -2.38
Col1a1P11087 Platr25-208ENSMUST00000222602 939 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Snord49b-201ENSMUST00000082503 72 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm25802-201ENSMUST00000082639 77 ntBASIC0.19□□□□□ -2.38
Col1a1P11087 Gm23130-201ENSMUST00000104252 74 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Mir467h-201ENSMUST00000116759 121 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm26303-201ENSMUST00000116845 119 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm25269-201ENSMUST00000122601 104 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Col1a1P11087 Gm42855-201ENSMUST00000197388 253 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm45704-201ENSMUST00000212582 403 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Mir10a-201ENSMUST00000083585 110 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Col1a1P11087 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.18□□□□□ -2.38
Col1a1P11087 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Col1a1P11087 Mir293-201ENSMUST00000104841 80 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm15213-201ENSMUST00000122098 216 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm6568-201ENSMUST00000122274 697 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.17□□□□□ -2.38
Col1a1P11087 Mir6346-201ENSMUST00000183982 81 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm28283-201ENSMUST00000185509 178 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm21673-201ENSMUST00000186640 436 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm20257-202ENSMUST00000188643 130 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm21135-201ENSMUST00000189023 436 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm37709-201ENSMUST00000195074 600 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm44345-201ENSMUST00000199560 135 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Col1a1P11087 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm24091-201ENSMUST00000082550 83 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm23453-201ENSMUST00000083326 106 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm23711-201ENSMUST00000083856 83 ntBASIC0.17□□□□□ -2.38
Col1a1P11087 Gm23744-201ENSMUST00000104231 149 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm12837-201ENSMUST00000120131 373 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm2768-201ENSMUST00000121062 250 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.16□□□□□ -2.38
Col1a1P11087 Gm25393-201ENSMUST00000157336 285 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm20543-201ENSMUST00000174200 726 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm27289-201ENSMUST00000183341 82 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm19855-201ENSMUST00000210145 249 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.16□□□□□ -2.38
Col1a1P11087 Gm46997-201ENSMUST00000222108 217 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Col1a1P11087 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Col1a1P11087 Gm25088-201ENSMUST00000101803 79 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm26143-201ENSMUST00000104480 108 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms