Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vti1aO89116 Gm13862-201ENSMUST00000121220 197 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Gm26405-201ENSMUST00000158495 100 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Gm24131-201ENSMUST00000158539 107 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.21□□□□□ -1.9
Vti1aO89116 Gm23268-201ENSMUST00000175494 78 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Gm24573-201ENSMUST00000175499 112 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Vti1aO89116 Gm25081-201ENSMUST00000082534 108 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Mir340-201ENSMUST00000083483 98 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Vti1aO89116 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.21□□□□□ -1.9
Vti1aO89116 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Vti1aO89116 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
Vti1aO89116 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Vti1aO89116 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm14748-201ENSMUST00000119819 411 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm25888-201ENSMUST00000157778 302 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm23642-201ENSMUST00000157858 258 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.2□□□□□ -1.9
Vti1aO89116 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vti1aO89116 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm23190-201ENSMUST00000180307 64 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm34139-201ENSMUST00000196166 294 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Gm25895-201ENSMUST00000083714 100 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vti1aO89116 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Vti1aO89116 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.2□□□□□ -1.9
Vti1aO89116 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vti1aO89116 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Vti1aO89116 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.19□□□□□ -1.9
Vti1aO89116 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.19□□□□□ -1.9
Vti1aO89116 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Vti1aO89116 Gm27532-201ENSMUST00000183726 113 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Gm27505-201ENSMUST00000185071 110 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Gm29658-201ENSMUST00000185404 230 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Gm15235-201ENSMUST00000200572 194 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Gm25199-201ENSMUST00000083095 104 ntBASIC3.19□□□□□ -1.9
Vti1aO89116 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Vti1aO89116 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vti1aO89116 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Vti1aO89116 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Vti1aO89116 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Vti1aO89116 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Mir344c-201ENSMUST00000103919 92 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm13885-201ENSMUST00000117569 187 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm25985-201ENSMUST00000122677 107 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm23101-201ENSMUST00000157550 137 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm23381-201ENSMUST00000157676 94 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Mir1951-201ENSMUST00000157981 89 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Vti1aO89116 Gm6003-201ENSMUST00000187903 463 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Snord80-202ENSMUST00000199023 77 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm45013-201ENSMUST00000206883 178 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Vti1aO89116 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.18□□□□□ -1.9
Vti1aO89116 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Mir693-201ENSMUST00000102187 89 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm14602-201ENSMUST00000118625 340 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm14491-201ENSMUST00000121919 199 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.17□□□□□ -1.9
Vti1aO89116 Gm28647-201ENSMUST00000188416 197 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.17□□□□□ -1.9
Vti1aO89116 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm10025-201ENSMUST00000079568 372 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm23246-201ENSMUST00000083371 67 ntBASIC3.17□□□□□ -1.9
Vti1aO89116 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.16□□□□□ -1.9
Vti1aO89116 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Vti1aO89116 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Vti1aO89116 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Vti1aO89116 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Vti1aO89116 Gm12449-201ENSMUST00000117572 234 ntBASIC3.16□□□□□ -1.9
Vti1aO89116 Gm25425-201ENSMUST00000157611 96 ntBASIC3.16□□□□□ -1.9
Vti1aO89116 Gm18213-201ENSMUST00000207850 178 ntBASIC3.16□□□□□ -1.9
Vti1aO89116 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Vti1aO89116 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Vti1aO89116 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Vti1aO89116 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Vti1aO89116 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.15□□□□□ -1.9
Vti1aO89116 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm25270-201ENSMUST00000122606 138 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm23324-201ENSMUST00000157421 131 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm22961-201ENSMUST00000157964 106 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm22483-201ENSMUST00000157986 274 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Mir28b-201ENSMUST00000175399 80 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm44425-201ENSMUST00000203739 429 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Gm44182-201ENSMUST00000204052 115 ntBASIC3.15□□□□□ -1.91
Vti1aO89116 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Vti1aO89116 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Vti1aO89116 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.14□□□□□ -1.91
Vti1aO89116 Gm6788-201ENSMUST00000166459 270 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 236.1 ms