Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm29469-201ENSMUST00000191448 315 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col5a1O88207 Gm44010-201ENSMUST00000204432 331 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Gm26447-201ENSMUST00000082448 129 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.22□□□□□ -2.21
Col5a1O88207 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.22□□□□□ -2.21
Col5a1O88207 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.21□□□□□ -2.22
Col5a1O88207 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm11065-201ENSMUST00000111462 228 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm25111-201ENSMUST00000116686 147 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
Col5a1O88207 Gm22101-201ENSMUST00000157928 103 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm24056-201ENSMUST00000158617 146 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm24348-201ENSMUST00000158710 130 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm23921-201ENSMUST00000175258 107 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm29397-201ENSMUST00000185205 333 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm36946-201ENSMUST00000192706 435 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm42925-201ENSMUST00000197359 285 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm44989-201ENSMUST00000204749 217 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm44655-201ENSMUST00000207768 423 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm44959-201ENSMUST00000209127 231 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm24764-201ENSMUST00000083686 199 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm26327-201ENSMUST00000093724 111 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.21□□□□□ -2.22
Col5a1O88207 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Col5a1O88207 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Col5a1O88207 Gm26500-201ENSMUST00000101867 106 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm25506-201ENSMUST00000104339 70 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm11854-201ENSMUST00000117839 446 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm13518-201ENSMUST00000120018 233 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm23184-201ENSMUST00000122594 131 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm16358-201ENSMUST00000146046 210 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm24716-201ENSMUST00000157524 104 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm27510-201ENSMUST00000158214 64 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm25486-201ENSMUST00000158726 63 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm17100-201ENSMUST00000168963 272 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Col5a1O88207 Gm44358-201ENSMUST00000196301 98 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.2□□□□□ -2.22
Col5a1O88207 Gm44052-201ENSMUST00000203382 396 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm45207-201ENSMUST00000207469 145 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
Col5a1O88207 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm25038-201ENSMUST00000082928 130 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Col5a1O88207 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.2□□□□□ -2.22
Col5a1O88207 Gm23142-201ENSMUST00000101848 105 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26240-201ENSMUST00000101893 105 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm16354-201ENSMUST00000155376 150 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26275-201ENSMUST00000157101 268 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm23829-201ENSMUST00000157392 270 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm24487-201ENSMUST00000178017 63 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm22448-201ENSMUST00000179254 107 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Mir6540-201ENSMUST00000184886 108 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm28825-201ENSMUST00000186233 238 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.19□□□□□ -2.22
Col5a1O88207 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26329-201ENSMUST00000093723 110 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col5a1O88207 Mir669g-201ENSMUST00000116809 123 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm14919-201ENSMUST00000120839 390 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm14629-201ENSMUST00000122428 144 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm24635-201ENSMUST00000122712 128 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26468-201ENSMUST00000158644 106 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm24618-201ENSMUST00000177718 94 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm23953-201ENSMUST00000178214 94 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26092-201ENSMUST00000179798 97 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26332-201ENSMUST00000179813 94 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm22863-201ENSMUST00000180265 94 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm26200-201ENSMUST00000180273 79 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Gm28724-201ENSMUST00000186149 625 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col5a1O88207 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.19□□□□□ -2.22
Col5a1O88207 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col5a1O88207 Gm15215-201ENSMUST00000117773 489 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm14298-201ENSMUST00000139032 237 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm16356-201ENSMUST00000143300 169 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm23718-201ENSMUST00000157350 307 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm23893-201ENSMUST00000158106 134 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm24005-201ENSMUST00000158459 296 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm27997-201ENSMUST00000184942 69 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm38019-201ENSMUST00000195133 380 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Mir7661-201ENSMUST00000197023 61 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm44055-201ENSMUST00000204376 247 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.18□□□□□ -2.22
Col5a1O88207 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.18□□□□□ -2.22
Col5a1O88207 Gm23462-201ENSMUST00000083264 104 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms