Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm25213-201ENSMUST00000102388 113 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm26435-201ENSMUST00000179026 107 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.58□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm8858-201ENSMUST00000118259 342 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm11219-201ENSMUST00000118565 358 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir6985-201ENSMUST00000184641 61 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.59□□□□□ -2.5
Trav4-3A0A0B4J1K1 Mir709-201ENSMUST00000102190 88 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25274-201ENSMUST00000104296 135 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23641-201ENSMUST00000157857 101 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm22914-201ENSMUST00000175195 77 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC126554.1-201ENSMUST00000222161 271 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC154552.4-201ENSMUST00000222171 151 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Snora75-201ENSMUST00000082903 133 ntBASIC-0.6□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm3788-201ENSMUST00000119949 136 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Atp2b4-208ENSMUST00000167348 243 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm28688-201ENSMUST00000187301 268 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm38231-201ENSMUST00000192030 347 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC154552.5-201ENSMUST00000222352 207 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC167977.2-201ENSMUST00000225676 682 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.61□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25088-201ENSMUST00000101803 79 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm9059-201ENSMUST00000118319 183 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm14368-201ENSMUST00000145305 415 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23410-201ENSMUST00000179967 107 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm27668-201ENSMUST00000184188 120 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm23814-201ENSMUST00000083230 102 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24018-201ENSMUST00000083232 107 ntBASIC-0.62□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm14887-201ENSMUST00000119522 663 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm25269-201ENSMUST00000122601 104 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24854-201ENSMUST00000158025 98 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC-0.63□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Snord89-201ENSMUST00000104516 110 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm26249-201ENSMUST00000116708 118 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm37923-201ENSMUST00000191624 161 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm44325-201ENSMUST00000196757 77 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-0.64□□□□□ -2.51
Trav4-3A0A0B4J1K1 Mir654-201ENSMUST00000104787 84 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24481-201ENSMUST00000157210 102 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.65□□□□□ -2.51
Trav4-3A0A0B4J1K1 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms