Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.15□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.15□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm26002-201ENSMUST00000101915 107 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm14931-201ENSMUST00000111079 253 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm6829-201ENSMUST00000119858 360 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm25384-201ENSMUST00000157807 105 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22802-201ENSMUST00000175621 89 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22584-201ENSMUST00000177935 92 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm25253-201ENSMUST00000179958 107 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir7039-201ENSMUST00000183852 85 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir8116-201ENSMUST00000184134 97 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22508-201ENSMUST00000082772 110 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm24038-201ENSMUST00000082872 159 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir224-201ENSMUST00000083608 82 ntBASIC0.14□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir466n-201ENSMUST00000104798 94 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm24306-201ENSMUST00000180229 79 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir6365-201ENSMUST00000183990 101 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir219b-201ENSMUST00000198317 65 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22884-201ENSMUST00000083127 140 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm25651-201ENSMUST00000083782 119 ntBASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm23422-201ENSMUST00000102000 107 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm14946-201ENSMUST00000119859 296 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm14846-201ENSMUST00000121868 216 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm23535-201ENSMUST00000157542 106 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm25557-201ENSMUST00000158084 315 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm25413-201ENSMUST00000158544 312 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm20689-201ENSMUST00000176033 279 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm28921-201ENSMUST00000190219 378 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm42805-201ENSMUST00000196158 276 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir200b-201ENSMUST00000083615 70 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.12□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22545-201ENSMUST00000104350 132 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm21894-201ENSMUST00000179631 546 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm20923-201ENSMUST00000190009 319 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm21088-201ENSMUST00000190875 316 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm33654-201ENSMUST00000221704 215 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.11□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm13475-201ENSMUST00000119290 234 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm14638-201ENSMUST00000121338 216 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22279-201ENSMUST00000157200 93 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22597-201ENSMUST00000157602 80 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22431-201ENSMUST00000158545 107 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir3079-201ENSMUST00000175428 90 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Mir7077-201ENSMUST00000183991 57 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm28661-201ENSMUST00000188231 681 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm26265-202ENSMUST00000196326 133 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm23503-201ENSMUST00000083903 107 ntBASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
Ighv1-52A0A0A6YXC3 Gm22831-201ENSMUST00000102473 109 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm14126-201ENSMUST00000122345 395 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm22186-201ENSMUST00000157822 122 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm25706-201ENSMUST00000157828 247 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm22764-201ENSMUST00000158370 92 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm17054-201ENSMUST00000169811 259 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm28408-201ENSMUST00000191557 463 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm44337-201ENSMUST00000196553 114 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm43114-201ENSMUST00000198298 343 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm45815-201ENSMUST00000220241 146 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.09□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Mir1197-201ENSMUST00000117037 120 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm14568-201ENSMUST00000119321 294 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm12779-201ENSMUST00000121496 143 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm23000-201ENSMUST00000157083 139 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm23542-201ENSMUST00000158208 96 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm25750-201ENSMUST00000175483 112 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm25451-201ENSMUST00000177832 121 ntBASIC0.08□□□□□ -2.4
Ighv1-52A0A0A6YXC3 Gm24518-201ENSMUST00000180275 94 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms