Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm45754-201ENSMUST00000212380 279 ntBASIC1.61□□□□□ -2.15
Trav5-4A0A075B652 Gm25258-201ENSMUST00000083049 107 ntBASIC1.61□□□□□ -2.15
Trav5-4A0A075B652 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trav5-4A0A075B652 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav5-4A0A075B652 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trav5-4A0A075B652 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm26255-201ENSMUST00000122492 103 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm14298-201ENSMUST00000139032 237 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm16356-201ENSMUST00000143300 169 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm23262-201ENSMUST00000158323 168 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm24668-201ENSMUST00000158935 104 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm17161-201ENSMUST00000169187 524 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm24818-201ENSMUST00000175093 161 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm25357-201ENSMUST00000082745 72 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Mir221-201ENSMUST00000083488 95 ntBASIC1.6□□□□□ -2.15
Trav5-4A0A075B652 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm23551-201ENSMUST00000116852 121 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm12941-201ENSMUST00000117934 220 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm22082-201ENSMUST00000157587 161 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm36946-201ENSMUST00000192706 435 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Trbv7-201ENSMUST00000193339 402 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm5010-201ENSMUST00000213131 260 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm24165-201ENSMUST00000082718 128 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm23412-201ENSMUST00000083017 107 ntBASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trav5-4A0A075B652 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.59□□□□□ -2.16
Trav5-4A0A075B652 Gm26077-201ENSMUST00000104064 123 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm26342-201ENSMUST00000104557 129 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Mir293-201ENSMUST00000104841 80 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm25450-201ENSMUST00000179144 107 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm23963-201ENSMUST00000179603 77 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Mir6917-201ENSMUST00000184111 61 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Mir7241-201ENSMUST00000184532 64 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm27443-201ENSMUST00000184660 98 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm37693-201ENSMUST00000194562 234 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm44473-201ENSMUST00000204039 152 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Gm25078-201ENSMUST00000082530 107 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.58□□□□□ -2.16
Trav5-4A0A075B652 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm11572-201ENSMUST00000119164 120 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm15536-201ENSMUST00000121411 114 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm24630-201ENSMUST00000122768 106 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm16328-201ENSMUST00000126985 196 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm25284-201ENSMUST00000180345 141 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm27517-201ENSMUST00000184347 236 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm27959-201ENSMUST00000185172 111 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm29037-201ENSMUST00000189092 313 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm37313-201ENSMUST00000191673 290 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm44063-201ENSMUST00000203307 376 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm44419-201ENSMUST00000203338 229 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.57□□□□□ -2.16
Trav5-4A0A075B652 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm12647-201ENSMUST00000118977 265 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm24262-201ENSMUST00000157431 144 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm22215-201ENSMUST00000157558 96 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm24737-201ENSMUST00000158861 100 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm22114-201ENSMUST00000177756 107 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm27540-201ENSMUST00000184950 187 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Mir378a-201ENSMUST00000198300 66 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm25930-201ENSMUST00000082785 107 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm22294-201ENSMUST00000083308 104 ntBASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trav5-4A0A075B652 Gm25090-201ENSMUST00000104000 132 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm25051-201ENSMUST00000158602 249 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm24277-201ENSMUST00000158661 104 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm23208-201ENSMUST00000158666 127 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm23474-201ENSMUST00000158884 75 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Mir6379-201ENSMUST00000183392 115 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm45543-201ENSMUST00000209327 88 ntBASIC1.55□□□□□ -2.16
Trav5-4A0A075B652 Gm24116-201ENSMUST00000103975 107 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm14906-201ENSMUST00000119265 390 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm23170-201ENSMUST00000157158 106 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm22603-201ENSMUST00000157603 96 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm24677-201ENSMUST00000158755 150 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm24229-201ENSMUST00000158830 118 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Gm25642-201ENSMUST00000175137 66 ntBASIC1.54□□□□□ -2.16
Trav5-4A0A075B652 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms