Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5538W4VSP6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Mir6982-201ENSMUST00000184354 68 ntBASIC17.34■□□□□ 0.37
Gm5538W4VSP6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5538W4VSP6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Gm5538W4VSP6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5538W4VSP6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5538W4VSP6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5538W4VSP6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Gm13559-201ENSMUST00000120476 863 ntBASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5538W4VSP6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Gm7370-201ENSMUST00000219471 767 ntBASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5538W4VSP6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm5538W4VSP6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.29■□□□□ 0.36
Gm5538W4VSP6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms