Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
H2afb3S4R1G7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb3S4R1G7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.28■□□□□ 0.04
H2afb3S4R1G7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Gm18666-201ENSMUST00000190039 958 ntBASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb3S4R1G7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms