Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac6Q9Z2V5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac6Q9Z2V5 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.3■■□□□ 1
Hdac6Q9Z2V5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hdac6Q9Z2V5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac6Q9Z2V5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm37935-201ENSMUST00000192012 982 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44357-201ENSMUST00000195897 142 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm19658-201ENSMUST00000196231 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44367-201ENSMUST00000196836 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44350-201ENSMUST00000197197 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44390-201ENSMUST00000197533 144 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44313-201ENSMUST00000198018 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44486-201ENSMUST00000198508 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44454-201ENSMUST00000198541 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44314-201ENSMUST00000199263 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44394-201ENSMUST00000199558 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44484-201ENSMUST00000199873 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44466-201ENSMUST00000200264 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gm44359-201ENSMUST00000200671 138 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac6Q9Z2V5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Gm15165-201ENSMUST00000118140 502 ntBASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac6Q9Z2V5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.27■□□□□ 0.99
Hdac6Q9Z2V5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac6Q9Z2V5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac6Q9Z2V5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac6Q9Z2V5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac6Q9Z2V5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Gm1401-201ENSMUST00000122048 772 ntBASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.26■□□□□ 0.99
Hdac6Q9Z2V5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac6Q9Z2V5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac6Q9Z2V5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac6Q9Z2V5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.25■□□□□ 0.99
Hdac6Q9Z2V5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac6Q9Z2V5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms