Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek4Q9Z1J2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek4Q9Z1J2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nek4Q9Z1J2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nek4Q9Z1J2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek4Q9Z1J2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nek4Q9Z1J2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.7■□□□□ 0.9
Nek4Q9Z1J2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek4Q9Z1J2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nek4Q9Z1J2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Gm12085-201ENSMUST00000119263 940 ntBASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nek4Q9Z1J2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek4Q9Z1J2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Gm17661-201ENSMUST00000170317 270 ntBASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nek4Q9Z1J2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms