Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hmg20bQ9Z104 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmg20bQ9Z104 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmg20bQ9Z104 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Gm13216-201ENSMUST00000117145 591 ntBASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmg20bQ9Z104 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Gm5417-201ENSMUST00000079706 384 ntBASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmg20bQ9Z104 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Gm37055-201ENSMUST00000191866 133 ntBASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmg20bQ9Z104 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmg20bQ9Z104 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hmg20bQ9Z104 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hmg20bQ9Z104 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20■□□□□ 0.79
Hmg20bQ9Z104 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20■□□□□ 0.79
Hmg20bQ9Z104 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.99■□□□□ 0.79
Hmg20bQ9Z104 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms