Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cldn9Q9Z0S7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Timm23-208ENSMUST00000226683 750 ntBASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn9Q9Z0S7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn9Q9Z0S7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cldn9Q9Z0S7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Gm22240-201ENSMUST00000175225 82 ntBASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn9Q9Z0S7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms