Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Smarcb1Q9Z0H3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Ank2-226ENSMUST00000189368 339 ntBASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcb1Q9Z0H3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcb1Q9Z0H3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Gm9103-201ENSMUST00000119371 405 ntBASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.61■□□□□ 0.41
Smarcb1Q9Z0H3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
Smarcb1Q9Z0H3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcb1Q9Z0H3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcb1Q9Z0H3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcb1Q9Z0H3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smarcb1Q9Z0H3 Gm27742-201ENSMUST00000184667 60 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms