Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atp6ap1Q9R1Q9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atp6ap1Q9R1Q9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.64■□□□□ 0.25
Atp6ap1Q9R1Q9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6ap1Q9R1Q9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Mir6982-201ENSMUST00000184354 68 ntBASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6ap1Q9R1Q9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms