Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn2Q9R0A1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn2Q9R0A1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.35■□□□□ 0.37
Clcn2Q9R0A1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn2Q9R0A1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn2Q9R0A1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn2Q9R0A1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn2Q9R0A1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn2Q9R0A1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn2Q9R0A1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn2Q9R0A1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn2Q9R0A1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn2Q9R0A1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn2Q9R0A1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms