Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr2e3Q9QXZ7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nr2e3Q9QXZ7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr2e3Q9QXZ7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Nr2e3Q9QXZ7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Gm13474-201ENSMUST00000122466 815 ntBASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr2e3Q9QXZ7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Gm10231-201ENSMUST00000181584 441 ntBASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Gm10175-202ENSMUST00000208752 441 ntBASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr2e3Q9QXZ7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr2e3Q9QXZ7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms